| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2953 |
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| Symbol | |
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| ID | 4482027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3662787 |
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| End bp | 3666395 |
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| Gene Length | 3609 bp |
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| Protein Length | 1202 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639723700 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_866850 |
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| Protein GI | 117926233 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.999143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATGC ATCGGTTGTT ACTGAGACAG CTGCGTCGGT CTATGGGCTT GGTTGACGAG
AGCGCTGTGG ATGCTCTGTT GCAGGAGTTG GATGCGCTGC CCGCCGAGCA GATCTCCCCA
GCAAGTGTTA AGGCGTTGCA TGGTCTAAAA ACCCTGTTGC AGCGGGTTGA ACAGACCTAT
GAACACAATG AGCGGGATCT GCTGTTGCGC AACCGCTCCT TGCACTTGAG CTCAGAAGAG
CTCTCTGACG CCAACGAGCG CTTGCGGCGA GAGACCGCGC GACAGGAACA ACTGCTTAGT
ACCTTGCGAC AGACGGCCAA CCATCTGTTG GAAGCCGATC AAAAACCGAC ACTGGGGGAA
GATGAAGCCA GCTTAGAACA GCTCTCTGAC CTTATGTCCC GTTTGGCGTT GGAACGCTCT
GAGTTCCGGC GTCATCTGGA GCGGCAAAAA TTCGCGCTGG ATCAACACGC CATTGTGAGC
ATCACCGACA CCAAGGGTGT GATCCTCTAT GCCAATGATC GTTTTTGCCA AATCAGTGGC
TACACGCAGG ATGAAATTTT GGGTCAGGCG CATAATTTGG TCAACTCCGG TTATCATGAT
TCGGGGTTTT TTGAAGTCAT GTGGCGCACC ATTGCCCGGG GTGAGGTGTG GAATGGTGAG
GTGTGCAATA AAGCCAAAGA TGGTCGTCTC TATTGGGTTT CGGCCACCAT TGTGCCCTTT
TTGGATGAGC GCGGTAAGCC AATCCAATAC ATTGCCATTC GCACCGATAT CACCCGGCAG
AAGGCACTGG AAGAGAAGAT CGAAGATAAT CGGCGCTTTT TACAAAGCAT CAGCGACAAC
ATTGGCGAGG GTGTTTTTGC GCTGGATGTC CAGGGCTTTT GTACCTTTCT TAATCCCGAA
GCCGAGCGTC TGTTGGGGTG GACACAAGAT GAGTTAGCAG GTCGATCCTT CCATGACACG
GTCCATTATC AGGATGCCGA AGGTATGCCC ATGAATGAGG CGGACTGCCC GGTTCATGAC
GCCGTGGATC GTGGTGTGGA TTACCGTTCG GATGAAGATG TCTTTATTCA CCGGGATGGT
GGTATTTTCC CGGTCAATAT CTCCGTGGTG CCGGTGCGTG AGGATGGGGT TGTCACCGGA
GCGGTGGGGG TGTTCCAAAA CATTACCGAG AGCAAACAGA TCCAGCGGCA ACTTAAGCAA
AGCGAGGAGC GTTTGCAAAT CGCGTTGGAT GCCTCCAATA CAGGATTTTG GGATTGGGAT
CCACTGCAAG ACCGAGCCTA TTTTAGCGAT CAATGGCTGT CGATGGTGGG TTACCAACAG
GGGGATATCC TTAATAACAG TACCGGCTGG CTGGACCTGC TGCATGGTGA GGATCTGCCC
CATGTGGAGC GCGAGTTGGA GGCCCACTTA AATGGGCAGC GTAAGAATTT TGAGGTAGAG
TTCCGCATGC GTCACAAGCA GGGGCACTGG GTTTGGATAC TTAGTTCCGG GCGGGTGATC
GAGCGGGATG AAGAGAAAAG AGCCTTGCGC ATGGCGGGCA TCCATAAAGA TATCAGCGAC
CGTAAACGGG TCGAGGATGA GCTCAAAAAG GCGATGCTGG ATGCGGAGAG TGCCAACCGC
TCCAAATCAG AATTTTTAGC CAATATGAGC CATGAAATTC GCACCCCCAT GAATGGCGTG
GTGGGTATGA TGGAGCTGCT TTCCAACACC GAACTTACCC CCGAGCAGCA GAGCCATATG
CGTACGGCGC GCAATTCAGC GGAGAGCCTG TTGACCATTA TTAACGATAT TTTGGATTTT
TCTAAGATTG AGGCAGGCAA GCTGGAGCTG GAGGAGATCG CCTTTGATCT GGCAGAGTTG
GTCGAGGATG TCACCGCGCT GCTGGCCCAG CGGGTAGACA GCGAAAAGCT GGAGCTGTTG
CACAATGCGC CTGCGGACCT ACCCATGCAA GTGGCGGGCG ATCCAACCCG CTTGCGGCAA
GTCTTGGTGA ATTTGGTGGG TAATGCGGTG AAATTCACCC CCGAGGGTGA GGTTGAAGTG
CGCATGACCG TTGAACGCCA AGATGCAGAT ACGGTAACGG TCTTAACCGA GGTGCGGGAC
ACGGGTATTG GTATTGATGA GGCGGTGCGG CCACGCCTGT TCCGCATGTT TACCCAGGCA
GATGGTTCGA CCACACGTCG TTTTGGGGGC ACCGGTCTGG GGTTGGCGAT TAGCAAACAG
CTGGTGGAGC TGATGGGTGG TGAGGTGGGC TTTTCCAGCG TGATGGGGCA AGGCTCTACT
TTCTGGTTCC GGATTACTTT TCCCATCGTC GCCAAGGCGC AAGCGGTGGC GGGCGGGGTC
GATTCTCTAC AGGGCCTCAG AGCGTTGGTG GTGGATGACA ATGCCACCAA TCGCAACCTG
TTAGGGCGCT ATCTAAGCAA TTGGGGCGTG ACCCATCTGG AGTGTGCCAG TGGCAAACAA
GCGCTGGAGA AGATTGCCGA TGCCGCCAAG TTTGGGCTCT CCTTTGATCT GGCTATTTTA
GACCTGCTTA TGCCGGGTAT GGATGGTTTG GCGTTGGCAG AGCGGATTAC GCAGATGGTC
CAGGATAAGC AGATTAAGCC TCTGCGGATG GTGTTGCTCA CATCGGCCCA TGCGCGTCGC
GAAGAGTTGG AGCAGGCCGG TGTGGTGGCG GCGCTCTCCA AACCCATTCG GCAAGCACAA
CTGCGCGCCT TGCTGGGGCA GGTGATGCGC GGGGAGCGGG TGGTTGGTGG TCTTGTTGAG
CGGATATCGC AAAATAACAT GAGTGCGACC TTCGACGCTG CTGTTTTGTT GGTTGAGGAT
CACCCAATTA ATCAACAGGT TGCTCGTGGT ATGTTGGCGG GCTTGGGGTG CCGGGTAGAG
ATCGCCAACG ATGGTCACGA AGGGGTGCGT CTGTTTGCTC GGCATCGCTA CGATTTGGTG
TTAATGGATA TCCAGATGCC CGGCATGGAT GGCTATGAGA CCACCGACGC GATCCGTCAG
ATGGAGCGTA GCGAGCGGTG GCCGCGAACC CCCATTGTGG CGCTTACCGC CAATGCCATG
GAGCAAGATC GTGATCGCTG CTTGGCTGCG GATATGGATG ATTATCTCAG TAAGCCGATT
AGTTTAGACC GGCTTAAAGC GGCCATGTCC AAGTGGTTGA AGACGATTGC AAAGTCTGAA
GAGCCTGAAG AAGTACTGGG GGGAGCTGTG GGGCAGCCTG AGAGCCCCTT GGGCGCGGTG
GCAACAGGAG GTGAGGATGA CAGCGTGGTG GATCTACGCA CGTTGGCCGC TTTAAAGTCT
TCGATGGCGG TTATTGAGGG GGGCTTTTTG CAAATTTTGC AATCCTATCT GCAAAGTACG
CCTAAGGCGT TAGAGAGTAT TGAACAGGGC ATGATTGATG GCGATGCGGC ACGGGTGCGG
GGTGCGGCGC ATAACCTTAA ATCAACCAGT TTGAGTTTAG GCGCGATAAC CTTGGGCAAA
GTCGCTCAAG AGATTGAGAC GCGGGGTAAA GAGGTTAAGT TGGATAATAT GGCACCGCTG
TTAGCGCGGG CCAAGGCCTG TTATGCCTTG GTGGCAGCAC GCTTAGAGGC CGAACAAGCC
AATCTGTAG
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| Protein sequence | MSMHRLLLRQ LRRSMGLVDE SAVDALLQEL DALPAEQISP ASVKALHGLK TLLQRVEQTY
EHNERDLLLR NRSLHLSSEE LSDANERLRR ETARQEQLLS TLRQTANHLL EADQKPTLGE
DEASLEQLSD LMSRLALERS EFRRHLERQK FALDQHAIVS ITDTKGVILY ANDRFCQISG
YTQDEILGQA HNLVNSGYHD SGFFEVMWRT IARGEVWNGE VCNKAKDGRL YWVSATIVPF
LDERGKPIQY IAIRTDITRQ KALEEKIEDN RRFLQSISDN IGEGVFALDV QGFCTFLNPE
AERLLGWTQD ELAGRSFHDT VHYQDAEGMP MNEADCPVHD AVDRGVDYRS DEDVFIHRDG
GIFPVNISVV PVREDGVVTG AVGVFQNITE SKQIQRQLKQ SEERLQIALD ASNTGFWDWD
PLQDRAYFSD QWLSMVGYQQ GDILNNSTGW LDLLHGEDLP HVERELEAHL NGQRKNFEVE
FRMRHKQGHW VWILSSGRVI ERDEEKRALR MAGIHKDISD RKRVEDELKK AMLDAESANR
SKSEFLANMS HEIRTPMNGV VGMMELLSNT ELTPEQQSHM RTARNSAESL LTIINDILDF
SKIEAGKLEL EEIAFDLAEL VEDVTALLAQ RVDSEKLELL HNAPADLPMQ VAGDPTRLRQ
VLVNLVGNAV KFTPEGEVEV RMTVERQDAD TVTVLTEVRD TGIGIDEAVR PRLFRMFTQA
DGSTTRRFGG TGLGLAISKQ LVELMGGEVG FSSVMGQGST FWFRITFPIV AKAQAVAGGV
DSLQGLRALV VDDNATNRNL LGRYLSNWGV THLECASGKQ ALEKIADAAK FGLSFDLAIL
DLLMPGMDGL ALAERITQMV QDKQIKPLRM VLLTSAHARR EELEQAGVVA ALSKPIRQAQ
LRALLGQVMR GERVVGGLVE RISQNNMSAT FDAAVLLVED HPINQQVARG MLAGLGCRVE
IANDGHEGVR LFARHRYDLV LMDIQMPGMD GYETTDAIRQ MERSERWPRT PIVALTANAM
EQDRDRCLAA DMDDYLSKPI SLDRLKAAMS KWLKTIAKSE EPEEVLGGAV GQPESPLGAV
ATGGEDDSVV DLRTLAALKS SMAVIEGGFL QILQSYLQST PKALESIEQG MIDGDAARVR
GAAHNLKSTS LSLGAITLGK VAQEIETRGK EVKLDNMAPL LARAKACYAL VAARLEAEQA
NL
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