Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2951 |
Symbol | |
ID | 4482025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3656466 |
End bp | 3659822 |
Gene Length | 3357 bp |
Protein Length | 1118 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639723698 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_866848 |
Protein GI | 117926231 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.38957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCATC GTAACAGTCT ACTTACGCTG TATATGGTTA TGGTGGTGGC GGTGGTGGCC GTGGCTGCGG GGCTATTGTT ACTGCTGTAC CAGGATAGCT TTGCAAAAAA ACAGGCGCAT TTGCAAGATT TGGCCACCAA TCAAGCACGT TTGATTGATG AGGTAGCCAA TTTCAATCAT TCATATCGTC ATGATTATCC AACCGGTGCG GTAGAGGCGA CCATAAGTCA GATCCGCGAT GCCCATGGCA AGAGCATTGG ATTTGGTCAA ACGGGGGAGT TTATTATTGC CTACCGTAAG TCTGGTCATA GTCACGTTCA TTTTATTGTG GCACACCGTT TTACGCAGGC GGTCACCCCA TCCTTTCGGG AAAACCCCAA CCATCTTCAC CCTGCTATGG CCCGTGCCAT GGCCGGGGAG AGCGGCTTTA TGGAGGGTAC CGACTATCGG GGTAAGCAGG TTTTGATCGC TTACGCACCG GTGGTCAAGC TGCGTATGGG GGTGGTGGCT AAAATGGATG TGCAAGAGGT CCTTGCCCCC TTTGAGCGAA TCTTAAAAAT AGGCTTATCA ATAACGTTAT TGCTCATAGG CGGGGGGAGC GTTGCCTATC TGTGGGTTGC CAAGGGTGTG GCCGGGCGCA TGGAGTGGCA GCATCAAAGG TTGGCTATGT TGGTTGAGGG TATGCCTGCT GTCATCTATA CCGAGGATCT CCGCACACAA CTTCCTTACT ATGTGTCACC CCAAGCGGTG GTATTGTTGG GGGGGCAGGG GTGCCAAGCT GACGAACCCC TGGATGTTTG GTGGAACCGT CATGTGTGGG CTGAGGATTG GGAAACGCTA CAGCACGCGC GACAGATGCT CAAAAAGCAC AAACGTCCGA TGCAGGTCGA GTACCGTATG GTGCGTCAAG ACGGTCAGCT TATTTGGGTG CGCGATGTGG CCCGTTTGGT GTGTGATGAG CAGGGGCTGC CACTGTTGGT GCAGGGTATG GTGATGGATG TGAGCGAGGC GCGGCATACC CATGAAAAGC TCATTGCCAG TGAGGTTAGA TTTCGTCAAC TCTATGAAAA TGCACCGATA GCCTATCAAT CGCTCAATAC GGAAGGGGTG ATTCAAAATG TCAACCAGGC ATGGTTGAAG AAAACCGGTT ATGAGCTTTC GCAAGTATTG GATCACTCCC TGTTTGAGTT TCTGGTGGTG GGCCAAGAGC AGGAGGTTGC CAAAAAATTT GAGGCCTTTT TACAAGCAGG TTATGTTCAA GATTTGCACT ATGAGCTGCG CTGTGCCGAT GGTCGAGCCC TTAAAGTTTC CATCAATGGG CAGGTGAGTC GGGACCGCTC GGGTCGGTTG GTTAAGACGC ACTGTGTTTT AACCGACATT ACGGAGCAAG ACCGTGCGGC GCAGGCGTTG CAGGAGAGCG AAAGCCGGTT ACGGCTGATT TTAGCGTCAA CGGGGGAGGG TCTGTTTGGT CTGGATTTGC AGGGGAACTT TATCTTTGCT AACCCAGCTT GCTTGCGCAT GATGGGCTAT AGGGATGATC GTCAGCTATT GGGTAAGCCG ATGCTGGAAA TTGTCAGTTG TTGTTCCTCC CAATTTGTAC GGCGGGGGAA GGGGAGCTGC CCGATTAGTC AAATTTTAAA AACGGGCCTG CCCAACCACG CTGAAGGAGA GCTGTTTCGG CGGGCGGATG GTAGCTTTTT TAGTACCGAA TTTTGGTCGC ATCCCATTCA GCAAAACGGG GAGCTGGTGG GTGCGGTGGT AACCTTTATC GACATCAGCC AGCGGGTACT CAACCAGACG GCGTTAAAGG CGTCTGAGCT TAAATACCGC ACCATTTTTG AGTCGGTACC GACCCCGCTG CTTATTTTGG ATACCAGCGG CGTGGTGAGG GATGTCAACT CCGCGCATCA AAGCACGTTT GGCCGTTTTG CCGGGGGCTC GTTGATGGGG GTTTCTATCC GAGAGCATCC GGGGGTGGCG GGTTCGCTGT TGGCAGAGAG CTTTTTGGCG CTGGCTAAGG GTGAGCCGAT GCCCTTGCAA CAGGCCAGCT ATACCATGGA AGCAGAGGGT GAGGCGATTC ACTTTAATGT GAGAGGCGTG CCCTTTGTAA CACGCGATGG TGAGGGGCGT GAGGATCTGC AAGGGGCGTT GGTGATTCAT GAAAACATCA CAGACCTCAA ACAGACCGAG CTGAAGTTGC GCAAGGCGGT GGAGGAGGCC GATTGCGCCA CCCATGCTAA GGGGGATTTT TTGGCGGTCA TGAGTCATGA GATCCGCACC CCTATGAACT TGGTGGTGGG CATGGCCGAG CTGTTGTTAG AAACCGATGT CAATGCCGAG CAAAAACACT ATCTGGAAAA GTTACAGAAG GCGGGGGATA CGCTGCTTAG TTTGATCAAT AATATTCTTG ATTTAACCAA ATTAGACGAG GGCCAGCTCA AGTTGCTGGA CGAGCCTTTT GCGCCACAGG CGTTGTTGGA TGAGGTGTCT GGCATCATCT CCCTAGCGGC TGAGGCTAAG GGACTGACCC TGAGTTGCGA GATTCAGGAG GGGGTGCCTG AGCGGGTCTT GGGGGATTCG GTGCGCATCA AGCAGGTATT GCTTAATCTG CTCTCCAACG CCTTAAAATT TACCCAGCAA GGGTTTATTC GTTTGTCGCT GACGGTTGAG GGCGCGGAGG GGGCGCAGCA GCTCTGTTAT GCGGTCAGTG ATAGTGGCAT GGGCATACCC GATTACCACT TGGACGAGGT GTTTGAGCGG TTTTCCCAGG GGGATAGCAG CATGACCCGC CGGTTTGGGG GCAGCGGTCT GGGCTTGGCG ATCTGTAAAA AGTTGGTTAT TTTGATGCAA GGGCAGATCC AGGTTAGCAG TCAGGTGGAC GTTGGGGCCA TCTTTCAGAT TCGTTTACCG TTACGTGCGG CGGCGTTGGC CCCTGCGTCG TCCCAGCAGC AGGTGAAGCG CCGTTTGAAC CAAGGGGTTA GGGTACTGCT TGCTGAAGAT GCCGTTGATA ATCGCATGCT CATACAGGCC TATTTGCGCA ATTCCCCCCA TGATTTAGTG ATGGTGGAGG ATGGTCAACA GGCTCTACAG CTTATAGAAG AGGGGACTGA TTTTAACCTG ATTCTCATGG ATGTGCAGAT GCCGGTGATG GATGGCTATA GTGCCACCCG CGCCATTTTG GCAGAGTTGG GGGCCCAACA GCGGCCCCCT TGCCCCATTG TGGCTTTAAC GGCCCATGCG TTGGAGGGGG ACCAAGCGCG TAGTTTGCAG GCGGGTTGTG TGGCGCATTT GACCAAGCCA ATCAAAAAGA AAATTTTGTT AGAGGCCATC CAAACCTATG CGCGGCTAGC CCCATAG
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Protein sequence | MDHRNSLLTL YMVMVVAVVA VAAGLLLLLY QDSFAKKQAH LQDLATNQAR LIDEVANFNH SYRHDYPTGA VEATISQIRD AHGKSIGFGQ TGEFIIAYRK SGHSHVHFIV AHRFTQAVTP SFRENPNHLH PAMARAMAGE SGFMEGTDYR GKQVLIAYAP VVKLRMGVVA KMDVQEVLAP FERILKIGLS ITLLLIGGGS VAYLWVAKGV AGRMEWQHQR LAMLVEGMPA VIYTEDLRTQ LPYYVSPQAV VLLGGQGCQA DEPLDVWWNR HVWAEDWETL QHARQMLKKH KRPMQVEYRM VRQDGQLIWV RDVARLVCDE QGLPLLVQGM VMDVSEARHT HEKLIASEVR FRQLYENAPI AYQSLNTEGV IQNVNQAWLK KTGYELSQVL DHSLFEFLVV GQEQEVAKKF EAFLQAGYVQ DLHYELRCAD GRALKVSING QVSRDRSGRL VKTHCVLTDI TEQDRAAQAL QESESRLRLI LASTGEGLFG LDLQGNFIFA NPACLRMMGY RDDRQLLGKP MLEIVSCCSS QFVRRGKGSC PISQILKTGL PNHAEGELFR RADGSFFSTE FWSHPIQQNG ELVGAVVTFI DISQRVLNQT ALKASELKYR TIFESVPTPL LILDTSGVVR DVNSAHQSTF GRFAGGSLMG VSIREHPGVA GSLLAESFLA LAKGEPMPLQ QASYTMEAEG EAIHFNVRGV PFVTRDGEGR EDLQGALVIH ENITDLKQTE LKLRKAVEEA DCATHAKGDF LAVMSHEIRT PMNLVVGMAE LLLETDVNAE QKHYLEKLQK AGDTLLSLIN NILDLTKLDE GQLKLLDEPF APQALLDEVS GIISLAAEAK GLTLSCEIQE GVPERVLGDS VRIKQVLLNL LSNALKFTQQ GFIRLSLTVE GAEGAQQLCY AVSDSGMGIP DYHLDEVFER FSQGDSSMTR RFGGSGLGLA ICKKLVILMQ GQIQVSSQVD VGAIFQIRLP LRAAALAPAS SQQQVKRRLN QGVRVLLAED AVDNRMLIQA YLRNSPHDLV MVEDGQQALQ LIEEGTDFNL ILMDVQMPVM DGYSATRAIL AELGAQQRPP CPIVALTAHA LEGDQARSLQ AGCVAHLTKP IKKKILLEAI QTYARLAP
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