| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2942 |
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| Symbol | |
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| ID | 4482016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3642096 |
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| End bp | 3644888 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639723689 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_866839 |
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| Protein GI | 117926222 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.346474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAGAG GAATTTTGGA GATGGCTTCA TCTCTCATAC GCAAGCTGGC CCAACGCTTC
CCCACCCTCT TGGGGAATCA AGCCCCTTGG CACATTTGGC TCAATTTTGC TTTTGGCCTG
ATCGCCTTGA TTATTGTTGC CTCCGCTGCC CTATCTGGGT TCCATCTTCA ACGTTATGGG
CAGATGGTCG AGAGCACCAC CGCCCAATCC TTTTCGGCTT TAGAAGCCGC AGAAGAGCTC
TCCGCGTACA GTGTGCTCCT GTCGGCGGGT CTACCCAGCA TGGAACACAC GCAACGTTTA
GAAGAATTGG CGCCATTAAC CAACCGTCTA AGCCTCCATC GCCAAAAGGT CAGAGAGCGT
TTGCAACAGT TGCAAGACTG GCTCCCTGCT GATCAATTGA GCCAGGTTCA AGAGCAACTC
GGACAGATGG GCGATGCGTT TTCCCAGCTT ATTTCTCTCC ATGTCACGCG CTTTCGCCTC
GCTTCGCAAA AGCAAGAGCA GCGCCATCGC ATGCGTAATT TGCGGGCCGC CTTGTTGGAC
ATCATCCCCC CCCTGGATTT TGCTTCTGAC GCCCTTACCC AATCCATCAG CCACTCACTG
CTAGAACAGT TTCAACAGGA ACGGCTAGCC CCTCTTCTGC AAACCGTACA ATTGGATGCC
GAACTGGCGC AGTTTACATT AGATCTTGCT CAGCAATGTT TCCCACAAAG CCCTAGCCAG
AGCCCAGCAA AACCTTTTAA CAACCCCATG CCACGGTTAC AGAGCTATAG CATGCAGTTG
CCCACCCTAA CCCCGCTTTT GCATAAATTA GCCGAACTCG GTCCCAACGC TTTTCAAGCC
CCTTGCCAAA AGGATGTTAC CTTAACCCTG TTGAAGTTAC TCCAGCAGAC CCATCAAGCC
AACACACAAG AAATTAAACA ATTAAATCTG GTTATTACCC AGCAGCTCCC CAGTAGCATC
GGACAGCTGT TAAAAGAGTC CACCGACCAT TACGCGCTAA CCATCTCCAT CAAAACCACC
AACAACCGTT TGCACTACAT ACTCACGGCG GCACTGCTGA CCCAAAACCT AGAGGAGTTG
CGACCACTGT TGCGCAGCGC CCGACAGACT TACGCCTTTT TAGCGGCTCA GGTTAGCCAG
TACAAAAACA GCCCCATGTC CACACAGAGC CCCCTATTGG TGGATAAAAT CGAATCCCTT
GTGCAACAGT TTAGCACCCT ATTGGAGGGG GATGAGGGCC TCTTACAAAA TCACCACAGG
CACCTATTAA ACAAACAAGC CATTGCTTTA AATATTAAAA ATAATTTACA CATCTCCAGC
CTGCTCTCCG CACGCGTCAC CCAACTGGTT AAGGATGTCA AACAACAGGT CAACAACCGC
CGCCAAACCA TGGCGGCCGG CCTGCCTAGC CAAATTTGGT TGTTGGCATT AACCACCTTG
GGGGGATTGC TGATCGTCAC CCTGATTGCT CTGCTTACCA GCCACCTACT CAAACAACGC
CAGCAGCAGC TCACGGAGGG GGCCAAACGG CTACGCATTG TGGTAGAAAA TATGCCGATC
ATGCTGCAAG CGTTCGATAA CAATCATAAC ATTGTAGTGT GGAACAGCGA GTGCGAACGC
ATTACCGGCT ACAGCCGAGC CGAGGTAATC GGTCAACAAC ACATTATGCA GCAGCTCTAC
CCTTTAGAGA TGACCCGCCA AAAGGTGCTC GACCTATTTA CCAAGCAGAA AAGCAACTTT
CGCAATGTCG AGTTTGATTT GACCAGCAAG ACGGGCACGC AACACACCAT CGCTTGGTCC
AGCAGCCACC ATCATTTTCC CATCCCCGGC TGGGGGGCTT GGGCGGTGGG GGTGGATGTG
ACTCAACGCA CCACATTAGA ACGTGAACTG CTGCTGCATC GGGATAATCT GGATACACTG
GTGCAAAGCC GGACCCAAGC CCTACAGCAA GCGATGCTGG ATCTGGGCAT TAAGACCGCA
GAGGTGGAAC GTTTTAACCG GGAACTTGCC CACCGTGTCG AGGAAGAGGT TGAAAACAAC
CGCGCGAAAG ATGGCCTGCT TATCCACCAA TCGCGCATGG CTGCAATGGG GGAGATGATC
GGCAACATCG CCCATCAATG GCGTCAACCC TTGAGCGCTG TTAATTTAAT TCTCTTTAAC
ATCAAGGATA TGTACCTGTT CGGCGAGCTT GATGAGAGCA CCTTGCAAGC CAAAACAGAG
CAAGCCAGCG CCTTGTTGCA AAGCATGTCT CAAACCATTG ATGATTTTCG TAACTTTTTT
AAACCTGATA AAGTTTTAGA GCATTTTGAT TTTAATTTAG CGGTCGAGCA TGCGCTCTCA
CTGGTTGCCT CGGCCATGGA AAATCACCAA ATCACCCTAC ATTTTGAACC TTATCCTGAA
CCCTTGATTA TTGAGGGCTA CCCCCGTGAA CTTTCCCAAG TCATTTTACT TTTATTAAAT
AATGCAAAGG ATGCTATAGT AGAGACCGAA CATCAAAAAG GGCTTATCTC TCTAAAACTT
ACAGAAGTTG GCACCCAAAC CAAGCTCACC ATCCAAGATA GTGGTAACGG TATACCAAAA
GATATTTTAG ATCGTATTTT TGAGCCTTAT TTCACCACCA AAGAAGAGAG CAAAGGCACC
GGTATTGGCC TATACATGGC ACGCATGATC ATAATGGAGC ATATGCATGG CACCATTATG
GCCCATAATG AACCCCAAGG GGCTTGTTTT ACCCTTAACA TACCACGGGC CGAGGGGCAT
ACCCTCAGCG CTGAGCAGGA ACAGCTTACA TGA
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| Protein sequence | MGRGILEMAS SLIRKLAQRF PTLLGNQAPW HIWLNFAFGL IALIIVASAA LSGFHLQRYG
QMVESTTAQS FSALEAAEEL SAYSVLLSAG LPSMEHTQRL EELAPLTNRL SLHRQKVRER
LQQLQDWLPA DQLSQVQEQL GQMGDAFSQL ISLHVTRFRL ASQKQEQRHR MRNLRAALLD
IIPPLDFASD ALTQSISHSL LEQFQQERLA PLLQTVQLDA ELAQFTLDLA QQCFPQSPSQ
SPAKPFNNPM PRLQSYSMQL PTLTPLLHKL AELGPNAFQA PCQKDVTLTL LKLLQQTHQA
NTQEIKQLNL VITQQLPSSI GQLLKESTDH YALTISIKTT NNRLHYILTA ALLTQNLEEL
RPLLRSARQT YAFLAAQVSQ YKNSPMSTQS PLLVDKIESL VQQFSTLLEG DEGLLQNHHR
HLLNKQAIAL NIKNNLHISS LLSARVTQLV KDVKQQVNNR RQTMAAGLPS QIWLLALTTL
GGLLIVTLIA LLTSHLLKQR QQQLTEGAKR LRIVVENMPI MLQAFDNNHN IVVWNSECER
ITGYSRAEVI GQQHIMQQLY PLEMTRQKVL DLFTKQKSNF RNVEFDLTSK TGTQHTIAWS
SSHHHFPIPG WGAWAVGVDV TQRTTLEREL LLHRDNLDTL VQSRTQALQQ AMLDLGIKTA
EVERFNRELA HRVEEEVENN RAKDGLLIHQ SRMAAMGEMI GNIAHQWRQP LSAVNLILFN
IKDMYLFGEL DESTLQAKTE QASALLQSMS QTIDDFRNFF KPDKVLEHFD FNLAVEHALS
LVASAMENHQ ITLHFEPYPE PLIIEGYPRE LSQVILLLLN NAKDAIVETE HQKGLISLKL
TEVGTQTKLT IQDSGNGIPK DILDRIFEPY FTTKEESKGT GIGLYMARMI IMEHMHGTIM
AHNEPQGACF TLNIPRAEGH TLSAEQEQLT
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