Gene Mmc1_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2940 
Symbol 
ID4482844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3639836 
End bp3641068 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content56% 
IMG OID639723687 
Producthypothetical protein 
Protein accessionYP_866837 
Protein GI117926220 
COG category[R] General function prediction only 
COG ID[COG3950] Predicted ATP-binding protein involved in virulence 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCATCC ACCACTTGCA CCTGACCCAT TTTCGGCGTT TTATTGATTT TAAGCTGACC 
TTAGATCCTC AGCTTACCCT TTTGGTCTCA CGCAATGGCG GTGGCAAAAG CGCATTGTTG
GATGCCTTAG CTTTGGCACT AAGCCCCTAT CTTAAACACC TGCCCACAGT GCGGGGCAAT
CGCTTACGCC ATGGGGATTT ACGCCTAACG CCCAAGGGAC GCACAGCCCC CTTTGTGCGC
ATCTTTTGCC AAACCAGCAC AGGCCTTCAG TGGGATCGCA CCCTCTACAA AGACCACGGC
AAAGCCAGTC GCAAGGCCGA ACGTAACGCG GTAGGGCGCA AGGCGCTACG CGCCTATGTG
GCGCGCAACT TTCAACCCAA CACGCCACAA TTGCCCATCT TTATCTATTT TGGCCATGGT
GCTCAGGAAA AAGCCAAACG GATGGAACCC TTACAGCGTG CCCACGCTTG GCTAGACACC
CTGCAACCCC ACGGTCAAGA GGCCTCGTTG CTGGAGGCGC TATTACAGCA GCCCGAGTGG
CATGCGCTGT TGCCTTGGGT CGAGCAGGCC ATGACCGCAG TGATCCCCGA ACTGAGTCAT
TTGCGCTGGC AGAAGAGTGA GGGGATACGG GTGGATTGGC AGAGCGAAGC GGGTGGCTCC
CGTTACCCCA TCCGCCTTAG CCAGCTCAGT CAGGGCTACC GGCGCATGTT TATTTTGGTT
ACGGAAATCG CCACCCGCAT GGCCCTGGCC AATCCCAATT TAAGCAACCT GTTAGAGAGC
ACCACGGGCC TTGTGCTTAT TGATGAGATC GAGATGCAGC TTCACCCCAG TTGGCAACAA
CGGGTTCTGC CCGACCTCAT GCGCACCTTT CCCAATCTAC AATTTGTCGT CACCACCCAC
AGCCCCCAAG TGGTGACCAC GGTCCCCCCC CACCATCTGC GTATTTTGCA CTGGGAACAT
GATCAGGTGC AGCTTCACTG TGCCACCTTT TCATTGGGCG CTAAAGCCCA TCAAGTGCTC
AAAGAGGTTT TGGGCACCGA CCCCCGCCCG GAACAGCTGG AGATTGTGCG CCAGCTGCGT
CGTTATCAAG CTTTGGTGGC CGACGGCTAT TGGGACCATG CCGAAGGGCA GGCGCTACGT
AAAATTCTGG ATGCTTGGGG TGCCGAACAT GAGCCTGAAC TGCGCCGCCT GGATATGGAT
ATACGCCTTA AAGAGCTGGA CCGGCTTACA TGA
 
Protein sequence
MRIHHLHLTH FRRFIDFKLT LDPQLTLLVS RNGGGKSALL DALALALSPY LKHLPTVRGN 
RLRHGDLRLT PKGRTAPFVR IFCQTSTGLQ WDRTLYKDHG KASRKAERNA VGRKALRAYV
ARNFQPNTPQ LPIFIYFGHG AQEKAKRMEP LQRAHAWLDT LQPHGQEASL LEALLQQPEW
HALLPWVEQA MTAVIPELSH LRWQKSEGIR VDWQSEAGGS RYPIRLSQLS QGYRRMFILV
TEIATRMALA NPNLSNLLES TTGLVLIDEI EMQLHPSWQQ RVLPDLMRTF PNLQFVVTTH
SPQVVTTVPP HHLRILHWEH DQVQLHCATF SLGAKAHQVL KEVLGTDPRP EQLEIVRQLR
RYQALVADGY WDHAEGQALR KILDAWGAEH EPELRRLDMD IRLKELDRLT