| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2935 |
|---|
| Symbol | |
|---|
| ID | 4482839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3631134 |
|---|
| End bp | 3633959 |
|---|
| Gene Length | 2826 bp |
|---|
| Protein Length | 941 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639723682 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_866832 |
|---|
| Protein GI | 117926215 |
|---|
| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2703] Hemerythrin |
|---|
| TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.328788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATG AAAAAAAATT AGGGAACACA CTGCTGCATC TTAGCCTGAA AGCGTCATTC
AGAATACTCT CTTTTTTAAT ATTAGTTTTG GTGATGTTGG CCGCCTTCAA TTATTGGAAA
ACGACTCAGC TCAAGTCGGA GTACGCCAAT ACCATCAACA TGGCAGGGCG TCAGCGCATG
CTTTCGCAAA AGGCGGCCAA AGAGGTGCTC TTTATTGCCG CTCTGCAAAA TGCCGGTGAA
AAACGTAAAG CTTATGAAGC GGGTTTGCAA AAAACGCTAC GCCTGTTTGA CCGTACCCTG
CAAGCCCTCA TCCAGGGTGG CAGCACCACC ACCACCTTGA ACCCGGATGA TAAAGAGGCC
GCCTCGCAGG TTGAAATGGT GCGTCCCTCT GCGGCGAATC TCGCCCAGTT AAAAAAAGTT
CAAGGGATCT GGCAACTCTA CCAACAAAGC ATAGCCGATG TGCTGAGCGA ACCACCAGGT
AAGCAACGAG ATGCCCTAGC GATCAAGCTT TTGGATGAAA GCGTGGTGTT GCTAAAAAGC
ATGAATGCAG CGGTGGTCAT GGTCACGGGT GAATCCAATA GCAAAGCCGA AAATGTGGTG
CTTGCCCTGA CCTGGACCAC GGTGTTTAGC CTGTTGATTG GTGCCTTTGT GCTGCTGTTT
ACGCTGTGGC GGCAATTTAG CTTAAATAAG CAGGTACGCC GTATTAGCAA CCACCTGGAT
CTGATGGCGG TGGGGGATCT TAACCGCCGT CTTGGACGCG ATTTCTGCGG GGAATTTCAG
ATCTTTGTTG ATCGCTTAAA CTCTATGAGC AACCAGCTGC TGTGGGTACT GCGAACGGTG
GGGGTGCAAT CCCAAACCAT TAAGGGCGTG GTCAGTCAGC TGATGCCTGT TAAAGAGTCT
CTGCTCCGAG ATGCCCATAC CAATAGCCAA TTGGCCAACG ATGTGGTGCT GGAAAATGAC
CGGCTGGATG CGGAAATTCA TAAACTTAAC GATTTTATCT ATCAGGCCAA AGAGTCCATT
TCGGCGGTGG CCGACTCTGC CGGGCAACTG GCCACCGATG TGCGGGCTAT TGCTCAGTCT
GCCGATCAAG CCAGCGGCAA TGTGAGCACC ATGGCCTCGG CCGCTGAAGA GATGAACTCA
AATATTTCTG AGGTTAACGC CAGTCTAGAG CGGGTTAATG CGTCGGTCTC CACGGTCGCC
TCGGCGGTTG ATGAACTCAA TAACTCTCTG GAACATGTTA CCCACAGTTG TGAATCGGCC
GATCAAATGT CCGCTGCGGC GGGGCAGCAT ATTTCAGAAG CACTAGAGGT GATGCACGTT
CTGGCAAGCG CGGCCAGAGA GATCGGCAAT GTCATCAAGT TAATTAATAA CATTGCGGAA
CAGACCAATA TGTTGGCCCT AAATGCCGCC ATCGAGGCCG CCGGGGCTGG CGAGGCGGGT
AAAGGGTTTG CGGTGGTGGC CAACGAGGTG AAAGATTTGG CCTCGCAAAC CGCCGATGCC
ACCAAGATGA TCGCCACCCA AGTAAGTGAA ATTCAGCTAC GTACCGAAAT GGCGTCAGAG
GCAACCCAAG GGGTGAGTGA CATTATCAGC TCACTGGCCG AAACCAACCG CATGATTACC
GAAGCGGTGG AGAACCAAGC CAGCTCGGTG GCGAATATTT CCGCTTCTAT GGATGCAGTG
ACCATGGCTT CGGGCGAGGT GACACGCAAT GCTCATGAAC TGGCGGCGGC TTCGCAAGAG
GTCGCGCGCA GTGCCTTGGA TGCCGCCAAT GACACCACGC AAATTGCTGA AACCGCAAGC
GTGCTCAGTG ATCTAGCCGA TCAGGTCAAC CAACAGATCG GTACGGCTGC GGATAGCTCG
GACGCGGTGC GCTTTGGGGC GGCAGAAATT CTCACCTCCT CGGTGCAGGT GCAGAAAAAA
ATGATGGAGA CCATGCAGCT GCTTGGCTAC CTTAATGGGG ATATTGAGTA TTCGGGATTC
CTTACGGAGG TTGTGGCTGA AACCAGTAAA TCATTGGATG CCGCAGAGCG TGGCTTTAAT
GTGGGGGAAC CCCTGTTTAG CATTGAGAAC ATTAAAGCGG CCCATCTGGC CTGGATTGGT
AAACTGGAAG ATGTCATCCA TGGCCGCAGC CGGTTGCGCT CTACTGATGT TGGGGGTGCG
CGGGATTGCG AGCTAGGCAA GTGGTACTAT GGTGAAGGTA AGGCGGCCTT TGGTGAAATG
GCGCGTTTTG TGGAACTGGG CGAGCTGCAT CTGCAGGTGC ATGATATGGC ACGCGAGGTA
ATCAAAATGG TGGAGGAGGG GCATCGAGAA GAGGCCATGG CCAGCATGTC CAAATTTGAC
CGAGTGCGAC GCCACCTGTT TAAGCTGTTA GATCAACTCT ATCTGAGTTG CGGTAAAGAA
GGGTGCGGTA CCGGGGAGGA GTTTTTTCCG TGGAACGATA TTCTATTGAC CAACGTTAAA
GAGGTGGATA TCCAACATAA AGAGTTGGTA CGGATGGTCA ATGCTCTGCA CCAAGAAATT
ACCAGCGGGC AGGGTGGCAA ACAAAAGCTG CGTACCATGG TGGATGGTTT GATCGCCTAC
ACCGTCAATC ACTTTAAAGA TGAAGAGGCA TTTATGCGCC GCAACCATTT TCCTGGTTTG
CAGGCGCACC TGCCAGAACA TATTAAATTT ACCGATGCGG TGGTCGAATT GGTGGCGCAG
GTGGATAAAG GTGAAGCCTA TATTGATATG GATCTCACCG GTTTGCTACG GGATTGGTTG
GTGAACCATA TCATGGGGAC CGACCGGAAA TATGCAGAAC ATTTTGCCGG CAAAAAGGTT
TCCTAG
|
|---|
| Protein sequence | MKDEKKLGNT LLHLSLKASF RILSFLILVL VMLAAFNYWK TTQLKSEYAN TINMAGRQRM
LSQKAAKEVL FIAALQNAGE KRKAYEAGLQ KTLRLFDRTL QALIQGGSTT TTLNPDDKEA
ASQVEMVRPS AANLAQLKKV QGIWQLYQQS IADVLSEPPG KQRDALAIKL LDESVVLLKS
MNAAVVMVTG ESNSKAENVV LALTWTTVFS LLIGAFVLLF TLWRQFSLNK QVRRISNHLD
LMAVGDLNRR LGRDFCGEFQ IFVDRLNSMS NQLLWVLRTV GVQSQTIKGV VSQLMPVKES
LLRDAHTNSQ LANDVVLEND RLDAEIHKLN DFIYQAKESI SAVADSAGQL ATDVRAIAQS
ADQASGNVST MASAAEEMNS NISEVNASLE RVNASVSTVA SAVDELNNSL EHVTHSCESA
DQMSAAAGQH ISEALEVMHV LASAAREIGN VIKLINNIAE QTNMLALNAA IEAAGAGEAG
KGFAVVANEV KDLASQTADA TKMIATQVSE IQLRTEMASE ATQGVSDIIS SLAETNRMIT
EAVENQASSV ANISASMDAV TMASGEVTRN AHELAAASQE VARSALDAAN DTTQIAETAS
VLSDLADQVN QQIGTAADSS DAVRFGAAEI LTSSVQVQKK MMETMQLLGY LNGDIEYSGF
LTEVVAETSK SLDAAERGFN VGEPLFSIEN IKAAHLAWIG KLEDVIHGRS RLRSTDVGGA
RDCELGKWYY GEGKAAFGEM ARFVELGELH LQVHDMAREV IKMVEEGHRE EAMASMSKFD
RVRRHLFKLL DQLYLSCGKE GCGTGEEFFP WNDILLTNVK EVDIQHKELV RMVNALHQEI
TSGQGGKQKL RTMVDGLIAY TVNHFKDEEA FMRRNHFPGL QAHLPEHIKF TDAVVELVAQ
VDKGEAYIDM DLTGLLRDWL VNHIMGTDRK YAEHFAGKKV S
|
|---|
| |