| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2933 |
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| Symbol | |
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| ID | 4482837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3628569 |
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| End bp | 3629684 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639723680 |
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| Product | glycine oxidase ThiO |
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| Protein accession | YP_866830 |
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| Protein GI | 117926213 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.789116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACATG TTGTGATTGT CGGGGCTGGG GTGATGGGGA CCGCATGTGC CTTTCGTCTG
TTGGAGCAGG GGTATCGCGT CACGCTCTTG GAAAAAGCCC TGCCTGGGGC CGAATCCTCA
GCCGCTGCCG CGGGCATCTT GGGGGCTCAA TCCGAGGTGT CAGGGGGAGG GGCTTTTTTA
GATCTGTGTG TCGCCAGTCG GGGCATGTTT CGGGATTTTG TAGGGCGTTT GCAGGATGTA
AGCGGCGTAC ATTGTGGTTA TGAAGAGAGT GGGGTGCTGG AAGTTGCCAT GGATCCTGCC
GAGGGGCGTT TGGCGGCTGG ACGGGCGGAG TGGATGTTAG AGCGCGATTT ACGGGTTGAA
ATATTGGACC GGGACGAAGC GCGTCGGTTG GAACCTGCAC TGAGCGAGCG CATCATAGGA
GCAAACTTTT ATCCCGATGA TCACCAAGTG GAGCCGGTGG CCTTGTCGCG CGCCTTGGCC
GCCGCCGTAG CGCGCTTAGG GGGGCAGTTT CGCAGCGGGG TACAGGTGAC AGGGCTGCAT
GTACAGGGGG AGCGGGTGGT GGGGGTGGCC AGCCGGGATG AGGTGATTCA TGGGGATCAT
GTCATCATTG CCGGGGGGGC CTGGAGCAGC ATGATTGGGG GGTTGCCCCC GCTGCGCACC
CAGGTGAAGC CTATGTCGGG TCAGATTTTG CAGGTTGAGA TGCGCCCCCC GGCCTTTCGA
CATGTGGTGT ATGGCTACAA AGGTTACATT GTGCCCCGTG CCGATGGGCG GGTGGTCATG
GGTTCAACCC TGGAAGACCG AGGCTTTGAT AAAGCCGTAA CCACCGAGGG CTTGCAGCGC
ATCACACAGA TGGCGCTGGA GATGGTGCCT CTGCTTAAGC AGGCCCGCAT GACCGATGCT
TGGGCAGGGC TGCGGCCTGC CACAGGAGAT GGCCACCCCT TGCTGGGACA AGGACCTTGG
CCGGGGCTCT ATTTTGCCAC GGGGCACTAT AGGAATGGCA TTTTAATGAC ACCCATTACT
GCTGAAGTGA CCACTCAGTT CATTATGGGT CAGGTACCCC CTTGGGATTT GACCCCCTTT
ACGCCCATAC ATTTGATGAA AGAGGGTCAT GAATAA
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| Protein sequence | MEHVVIVGAG VMGTACAFRL LEQGYRVTLL EKALPGAESS AAAAGILGAQ SEVSGGGAFL
DLCVASRGMF RDFVGRLQDV SGVHCGYEES GVLEVAMDPA EGRLAAGRAE WMLERDLRVE
ILDRDEARRL EPALSERIIG ANFYPDDHQV EPVALSRALA AAVARLGGQF RSGVQVTGLH
VQGERVVGVA SRDEVIHGDH VIIAGGAWSS MIGGLPPLRT QVKPMSGQIL QVEMRPPAFR
HVVYGYKGYI VPRADGRVVM GSTLEDRGFD KAVTTEGLQR ITQMALEMVP LLKQARMTDA
WAGLRPATGD GHPLLGQGPW PGLYFATGHY RNGILMTPIT AEVTTQFIMG QVPPWDLTPF
TPIHLMKEGH E
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