Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2915 |
Symbol | |
ID | 4481967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3605648 |
End bp | 3607945 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639723658 |
Product | hypothetical protein |
Protein accession | YP_866812 |
Protein GI | 117926195 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.554737 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAATGAGA ACTATATGGA AACATGTGGT GAAAAACTGG TTGCAGCGGG TTTTCAGATC CTGCCTATTG CCCCTGGGAA GAAATACCCA GGCAGTTATC ATCAAGGCAA ATGGAGCCCC TACAAGGGAT GGAACAAGCA TGCTGAGCGT GCAACCACAG CGTTGGAATT ACAGGTGTGG AAACAGTGGC CAGGTGCGGG GATTGGTGTT CCTGGAGGTC AGGTGGCTGG TATTGATATC GATGTGGCCG ATGAGTCAGT TTCACTGCAA CTGGAACAGT TGGCCATGCG CCTATTTGGT GAGACCAAAG CCGTGCGTAT AGGGCGTGCG CCAAAACGGT TGCTGGTCTA TCGCACCGAT ACTCCCTTCA AAGGTATCAA AAAGCACCCC TTGGAGGTGC TCTGCCTCGG GCAGCAGTTT GTAGCTTATG CCATCCACCC AGATACGGGC CACCCATACC AGTGGATCAA CCAGGAGCTT ACGGATCTGA AAATTGAGGA CCTGCCGGTC ATCACCGAGC AGCAAGCGCA CCATTTCATC GAGCAGGGAC TCGCACTTTT GCCTGTAGAA ATGAGACCAG CACGGCTTGA AGCGAGAGGG GATAGTTGTA ACAGCTATTC AGCGATCTCT ACAGTTATTT CCCATAGCCA GGCAGGAACC TATGAGGCGG TCGCCGACGC TATGCGATTC ATCTCCAATG CGGATCTTCC GTACGATGAT TGGATGCGTA TTGGCATGGC AATCAAAGGG GCTTTGGGTG ACGCAGGGGA AGTGTTGTTT GCCGAGTGGT CAGCATCCTC TGCGAAGAAC ATCGCCCAGG AAACATTCAA GGCCTGGTCA GGGTTTAAGC CTACCATCAT CGGGGCTGGG ACCATCTATC ACCTGGCTGG GCAAAGCGGC TGGAAACCTG ACTCTTCCAC CATTCTCAAC CCAGCCAATC TTCAACCTAA TGGCCCTCAT CCGGCAGCTG GATTGTTGGC CAAGATCAGC AAGCCTGTGG AACCAGAGGA TGGGAAAGCA CCGCAACCAC CGTTTCTTGA GGGGCCTGAG TGGGATCCAA CCGATGTGGA TGGGGCTTTG GGTATGCTGG TCCAGCACAT GGTGTCAACG GCGACACGCC CCCAGCCGAT CCTTGCGGTG GGCAATGCCC TGTGTGCTCT AGGAGCGCTC ATGGGGCGGC GATATCGGAC CGAGACCAAT CTGCGGAGTA ACCTTTATGT TGTTGGTATT GCAGATAGTG GGGCTGGAAA AAATCATAGC CGAGAGGTGG TGATCGAGTT GTTCCTCAAA GCGGGTTTCC TGGAATATCT TGGAGGAAAC CGCATTGCGT CAAGTGCCGG ATTGCTGCGG GCTGTGCATG AGCATCCAGC AATTTTATTT CAACAAGATG AGTTTGGGAT GTTCTTGCAA GCGGCCGCTG ACCGCTTGCG AAGTCCCCGG CATATCACAG ATATTTTGGA CCTCATGACG GAGTTTTACT CTTCGGCATC GACCACGTTT TTGGGGCCTG AGTATGCAAA TCCTGACAAA AAAGGGCGTA AAGATATCGT GCAGCCATGC CTGTGCGTTT ACGGAACCAC CACGCCTGTT TTGTTTTGGT CAGCGCTAAA AAGTGCCAAT GTCGCTGATG GGTCGCTTGC ACGTTTTTTG ATCCTGAAAT CTCAGGATGA TTACCCTGAT TTGGAGAGAG AAAATGTCGT AAAACCAATG CCTGATAAAT TGGCCCAGTT GGTTAAATCA ATAGCCGATG GAGGGTGTGT TGGCAGCGGT AACCTAGCAG GGGTTTTGAA TGGGCCAGAA ACCTTGATAG AGCCCATGGT TGTACCAATG GATCATGGGG CTCGCGTGCT GTTCAAAGCC TTAGAATCAC AGGTTATGGG CAAGCTTCGA GATTCACGGG CAACGCTCTG GTCTCCTGTG CTGGCGAGAG TGTGGGAAAA TGCCGCAAAG GTTGCATTGA TCAAAGCCGT TTCTGCAAAT CCTACAGAAC CGGTTATCCG GGAAGTGGAT GCGTTATGGT CCATTGCGCT GGTGCGCCAT TCCGTGAATG AAATGATTCG TGATGTTGAG CAGCATATTG CGGATAACCA GACGGAGCAG AATCACAAAC GGATTTTGTC GATTATAAAA AAGGCAGGTC CAGGAGGGGT AACCATGGCA GGGCTTTCTC AGAAGGCGCG TTTTGTGGAT CGACGATGTA GGCTTGAGAT TCTTCAGACC TTGGTGGAGA GTGGCCAGGT GTCAGAAGTA AAAATTCCTG GCAAAACAAA GATATCAACG CTGTATCGCA TGGCGTGA
|
Protein sequence | MNENYMETCG EKLVAAGFQI LPIAPGKKYP GSYHQGKWSP YKGWNKHAER ATTALELQVW KQWPGAGIGV PGGQVAGIDI DVADESVSLQ LEQLAMRLFG ETKAVRIGRA PKRLLVYRTD TPFKGIKKHP LEVLCLGQQF VAYAIHPDTG HPYQWINQEL TDLKIEDLPV ITEQQAHHFI EQGLALLPVE MRPARLEARG DSCNSYSAIS TVISHSQAGT YEAVADAMRF ISNADLPYDD WMRIGMAIKG ALGDAGEVLF AEWSASSAKN IAQETFKAWS GFKPTIIGAG TIYHLAGQSG WKPDSSTILN PANLQPNGPH PAAGLLAKIS KPVEPEDGKA PQPPFLEGPE WDPTDVDGAL GMLVQHMVST ATRPQPILAV GNALCALGAL MGRRYRTETN LRSNLYVVGI ADSGAGKNHS REVVIELFLK AGFLEYLGGN RIASSAGLLR AVHEHPAILF QQDEFGMFLQ AAADRLRSPR HITDILDLMT EFYSSASTTF LGPEYANPDK KGRKDIVQPC LCVYGTTTPV LFWSALKSAN VADGSLARFL ILKSQDDYPD LERENVVKPM PDKLAQLVKS IADGGCVGSG NLAGVLNGPE TLIEPMVVPM DHGARVLFKA LESQVMGKLR DSRATLWSPV LARVWENAAK VALIKAVSAN PTEPVIREVD ALWSIALVRH SVNEMIRDVE QHIADNQTEQ NHKRILSIIK KAGPGGVTMA GLSQKARFVD RRCRLEILQT LVESGQVSEV KIPGKTKIST LYRMA
|
| |