| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2882 |
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| Symbol | |
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| ID | 4482887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3582475 |
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| End bp | 3586026 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639723625 |
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| Product | TP901 family phage tail tape measure protein |
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| Protein accession | YP_866779 |
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| Protein GI | 117926162 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5283] Phage-related tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.143408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.327483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGAA CTACTGCCGC CTTGTCGTTC GTTATCCGAG CCAACGATGA TGAACTGCGT
TCTGCTGTCA CCCGTATGCA AAGCGACTTC CGTCAGGGCG TGCAGTCCAT GGCCTCGGCT
GCCCAGACCC AGGCGCAGCG TATCAATGGG GCACTGTCGG ACATCGATGG TTTTCGCAAT
CTGAAACGGC AGATCCAGGA GAGTGAAGAT CAATGGCAGG CGGCCACCCG TGAGGTGGCC
CGTCTTGCGG TGCAGATGCA AGAGACTGAA ACCCCCACCC GCGCCATGAC CCGTGCCTTT
GAGCAGGCCA AGCGTAATGC CCGTGCTCTT AAGGATCAGC TGGATGCCCA GCGGGAATCC
CTCCATGCTT TGCGGGGTAA CTTGCGTCAG GCCGGAGTAG ACACCAGCCG TCTCAGTGAA
AGCCAGGAAC GCCTCCAGCG GGATCTGCGA TCGGCTACCC GTGAGGTTCA AGCGCAGAGC
CGCGTGAACC GCGCCTTTGC CACCATCGGC GTGCGCTCCA TGCGCGAGGT AGAGAGCGAA
GTCCAGCGGC TGGAAAACGC CTATCGGGAA CTGGCCCGCT CCGGTCGGGT TTCTGCGGCG
GATCTAAATC GTGCTCATCA GCAGATGCAG AGCCGGGTGC GGACCCTGCG CGGTGAGATG
CATGGCCTGA ACAGTACCAT GGGCGGCATG GCCGGTACGG TACGGAATCT GGTAGCGGCC
TACGCAGGGT TTGAATCTAT CCGAGCGGCC TTCGGCTTTA TCAAGGATTC CATCCTTACC
TATGCCGCCT TCGATGACAC CATGAGGCAG GTGGCGGCGA CGTCGGGCGC AACGGCAGAA
GAGCTCACCC TATTGACCGA GCTGGCCAAG GAGATGGGCT CCTCCACCCG TTTCTCGGCC
ACTCAGGCAG CGGGTGGTCT GAAAGCCATG TCCCTGGCGG GGCTCTCGGC ATCCCAACAG
CTTCAAGCTC TACCAAAAGT TTTGGAGCTC GCTGCTGCGG GTTCGGTTGA TCTGGAGACC
GCAGCGGGGA TCGCTACCGC CTCCATGGCC CAGTTTTGGT TGCAGGCCGG TGAGCTTGGG
CATGTAAATG ACATCCTGGT CACTGCCTTC ACCAACTCCG CCACCAACAT CCAGGATCTG
GGGCTGGCGC TGCAATATGC GGGACCGGTA GCCAAAGCTG CGGGGAACAG CTTTGAAGAG
ACCGCCACCG TTCTGGCCCT GCTGGCCAAG AACGGCTTCT CTGGGGAAAA AGCGGGTACC
GCCCTGCGTG CTGCCTATGC TCGTCTGCTG GCCCCGGTGG ATAAAGCCCA AGAGGCCATC
AACCGTATGG GCCTTCAGAC CCATGATGCC ACCGGCCAAC TGCTGCCCAT GACTGGTGTG
CTGCGCAACC TGAAGGTAAG TGGGGCCGAT GCCGCCGACA TGATCCAGAT CTTCGGGGTG
GAAGCCGCGC CTGCGTTGAC CGCTGCCGTA GGCATGTCCT CCCAGGCCTT TGAGGCGTTG
GTGGCCAAGT TTAATGAAGT GGGTGGCGTC GCCGGACGTG TAGCTACCGA GATGGAAGCG
GGCATGGGCG GGTCCATCCG TTCCCTGGAG TCCGCATGGG AGGGGGTGAA GATTGCGGTT
GGTGAGGCCA TAGACAAACA CAGTTCATTG AATCTCCAGG ATCTCACCGC TGCCATCAAT
GAAAACAAGG ATGCCATCGT CGAACTGGCC CTGGCTGGTG TGGATCTGGC TGCCATGCTG
GGTCGAGTGG CTCTGATGGT TGGCGAGTTC ATCCTAGCGT GGAAAGAGGT CATCGGCGTG
CTGGGTGGGG CGTATCTGGC CATCAAAACC CTGCGTGTGG CCATGGCAGC ACTCACTGCA
CTTCAGACCG CTCAGTGGTT TCTAACCGTT ACCCGTGCTG CCTCTGGCTT GGTAGCCGTG
GTAGGCGCTC AGGGATTGGT TGGCGCATTG GCGCTGGCCC GCACCCGTCT GCTCTCTCTT
ATCTCCATCA ATCTGGCCGG GTTCTTTATC CGGGGTGCTG CCGCTGTTGG CAGTCTACTC
GCCGTGCTTA CCGGTCCGGT GGGGCTTGTA GCTGGCGCTA CCGCTGCTGT GGGGGCTCTG
GGCTATATGG CCTACTCCTG GTTGAAAACC AAGGATGCCC AGGATGAGGC GGTTGCATCG
GGTCAAGCAG CGGTTGAAAC CCAAAAGCAG GTAGCGGATC GCCTCAAACA GATCGGCCAG
CAGCTAGGGA TCAATATCCC CGATATGGAG ACCTTCAACC GTCTACAGCG GGAAGGCACC
ATCATCGCCG ACAAAAGCAC CGGGGGATGG CGCTTGGCGG CACAGGCTGC CTCGGAGGCA
ATCCAGACCC AACGGCGTGC AGCCCAGGAA GCGGCCAACC AGCTATCCAA CTTGACCCGC
CAGCGGACAT CTGCCCAGCG CAAACTGGCT GCTTTGGAGC AGCAGCTGGC TGAAGAGCAG
AAGCGTCAGG CCCGTGAGGT GCTTACCGAG AAGATCCGTA CTGCTGAACA GTCGGTCCAG
GCCACCGAGC GTGCCCTGCA ACAGAGCCTG ACTGCTGAGA AGCGATTGGC CGATCAGATC
CAGGGCATCG AAGAGAAAAA GCGCAACGCC CGTATCTCCA CCGAGGATAA GGTGCGCTCG
CTGTTGGAAC GCAACATGTC CGACCGGGAG AAAGAGACCT CCCGCGCTGC AGCCGCTTCC
CAAAAACTGG CTGAAGCTCA GAGGCTTCTT TCCCAAACAA CGCTTTCCGA GCAGGACATT
AAATGGGCCG AATCCCTGGC CCGTGGGGCC CAGGATGCCT TCTCCAGTTT GAATGATACC
TCCACCGCCA TCCGGGGTGT GCAGGATGCC GGGGATGTGC TGGATCAACT CTATCAGCGC
CAGGAGGAGA GTGCACGAAA AGCGCTTTCT ACCCAGAAAG ATCAGACCAC ATCTCTTACC
GAGCAGTTGG AAACAGCACG TGGTCAGGTG GATCTGCTCA AACAGGCTAT GGAAGCCCTT
CCTGACCGGG TCACCAAATC AGTCGAGCTT CAGGCCCAGG TTGAGCAGGC CCAATCTGCA
CTCTCAGCCA TCGAAAAGCA GATGGCGGCG TTAAAAGACA AGACCATCAC CGTAACCGTG
CAAACGGTAG AGGCCAGACA GGCAGGGGGT ATGATCGGTC TGAACCGGGG TGGTCGTCTC
CCCGGCTATG GGGGTGGGGA TCGGATTCAC GCCTTGTTGG AAGCCGGTGA GATTGTCATT
CGCAAAGAAC GCTCCCGGGT CTTCCGTGAT CTACTGCTGA TCATCAACTC CGCGCCCATG
GATACGGTGC GGCGCATCCT GCCCAACCTT CCCAGGTTTC AAACCGGGGG GATGGTGGGG
CTTCCGGAGA TCCCAGCGCT TCCTCAGCTC TCCTTTGCTG GAGCCGGTGG AAATCAACAG
CCCTCAGTAG AGGGGATCGT TCAGCTTGAT CTGACCATGA ACAGCAGACC AGCGGCCTCC
ATCACTAGCC CCCGGCAACA GGTGCGGCAA CTGGTAGATG CCCTCAAGGA ACTGCAGCGC
GGTACCTTCT GA
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| Protein sequence | MARTTAALSF VIRANDDELR SAVTRMQSDF RQGVQSMASA AQTQAQRING ALSDIDGFRN
LKRQIQESED QWQAATREVA RLAVQMQETE TPTRAMTRAF EQAKRNARAL KDQLDAQRES
LHALRGNLRQ AGVDTSRLSE SQERLQRDLR SATREVQAQS RVNRAFATIG VRSMREVESE
VQRLENAYRE LARSGRVSAA DLNRAHQQMQ SRVRTLRGEM HGLNSTMGGM AGTVRNLVAA
YAGFESIRAA FGFIKDSILT YAAFDDTMRQ VAATSGATAE ELTLLTELAK EMGSSTRFSA
TQAAGGLKAM SLAGLSASQQ LQALPKVLEL AAAGSVDLET AAGIATASMA QFWLQAGELG
HVNDILVTAF TNSATNIQDL GLALQYAGPV AKAAGNSFEE TATVLALLAK NGFSGEKAGT
ALRAAYARLL APVDKAQEAI NRMGLQTHDA TGQLLPMTGV LRNLKVSGAD AADMIQIFGV
EAAPALTAAV GMSSQAFEAL VAKFNEVGGV AGRVATEMEA GMGGSIRSLE SAWEGVKIAV
GEAIDKHSSL NLQDLTAAIN ENKDAIVELA LAGVDLAAML GRVALMVGEF ILAWKEVIGV
LGGAYLAIKT LRVAMAALTA LQTAQWFLTV TRAASGLVAV VGAQGLVGAL ALARTRLLSL
ISINLAGFFI RGAAAVGSLL AVLTGPVGLV AGATAAVGAL GYMAYSWLKT KDAQDEAVAS
GQAAVETQKQ VADRLKQIGQ QLGINIPDME TFNRLQREGT IIADKSTGGW RLAAQAASEA
IQTQRRAAQE AANQLSNLTR QRTSAQRKLA ALEQQLAEEQ KRQAREVLTE KIRTAEQSVQ
ATERALQQSL TAEKRLADQI QGIEEKKRNA RISTEDKVRS LLERNMSDRE KETSRAAAAS
QKLAEAQRLL SQTTLSEQDI KWAESLARGA QDAFSSLNDT STAIRGVQDA GDVLDQLYQR
QEESARKALS TQKDQTTSLT EQLETARGQV DLLKQAMEAL PDRVTKSVEL QAQVEQAQSA
LSAIEKQMAA LKDKTITVTV QTVEARQAGG MIGLNRGGRL PGYGGGDRIH ALLEAGEIVI
RKERSRVFRD LLLIINSAPM DTVRRILPNL PRFQTGGMVG LPEIPALPQL SFAGAGGNQQ
PSVEGIVQLD LTMNSRPAAS ITSPRQQVRQ LVDALKELQR GTF
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