| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2871 |
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| Symbol | |
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| ID | 4480819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3573007 |
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| End bp | 3574065 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639723615 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_866769 |
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| Protein GI | 117926152 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0630235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTTA TCTTGATTAC CGGATCCGCT GGCCTGATCG GCTCTGAGGC CGTGCGCTTT
TTTTCTAGCC AAGGCTTTGA AGTGGTGGGT ATCGACAATG ATATGCGTCA ATACTTCTTC
GGTTCCGAAG CCAGTACACG CTGGTCCCAG GAAAAACTTC AGGCCAGCGT ACCCCGTTAT
CAACATGAGT CGCTGGATAT CCGCAACTAT GAGGCCCTGG AACAGCTGTT TGCCCGCTAC
GGAGATAATA TTTCCGGCAT CATCCACACC GCGGCGCAAC CATCCCACGA CTGGGCCGCA
AGGGAGCCTT TGACCGATTT TTCCGTCAAT GCCGTGGGTA CCCTGAATCT GTTGGAGTTA
ACCCGTCTGC ACTGTCCCAA AGCTGTGTTT ATTTTTACCA GCACCAACAA GGTCTATGGC
GACACCCCCA ACCGCCTGCC TCTGGTGGAG GAAGAGACCC GCTGGACCAT CCGCGACACC
CACCCCTACG CAAAAGATGG CATTGATGAA CTGATGAGCA TCGACCAGAG CACCCACAGC
GTTTTCGGGG CCTCCAAAGT GGCGGCGGAT GTGATGGTGC AGGAGTATGG CCGCAATTTT
GGCCTCGCTA CTGGCTCCTT CCGGGGCGGC TGTTTAACAG GCTCGGGGCA CTCGGGGGCA
GAGTTGCATG GCTTTTTGGC CTATTTGATG AAGTGCGCCA TGGAAAAGCG CCCCTATACC
ATCTTTGGTT ACAAGGGCAA ACAGGTGCGC GACAACATTC ACTCTAGCGA CCTGATTCAC
GGCTTTTGGC ACTTTTTTCA AAACCCACGC CCCGGCGAGG TTTACAACAT GGGGGGCGGG
ATGGATTCCA ACTGCTCCAT GCTAGAAGCC ATTGAGTTAT GCCAACAGAT TACCGGCAAT
ATCCTGGATT TCAGATACAG CGAAACCAAT CGAACCGGTG ACCATATCTG GTGGATTTCT
GACCTGAAAA AGTTCAAGGA TCACTATCCC CAGTGGCAAC TTGAATTCAA CGTAGAGCAC
ATTCTTCGCG AGATTGAAGG GGGCTTGAAA ACACGCTGA
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| Protein sequence | MSVILITGSA GLIGSEAVRF FSSQGFEVVG IDNDMRQYFF GSEASTRWSQ EKLQASVPRY
QHESLDIRNY EALEQLFARY GDNISGIIHT AAQPSHDWAA REPLTDFSVN AVGTLNLLEL
TRLHCPKAVF IFTSTNKVYG DTPNRLPLVE EETRWTIRDT HPYAKDGIDE LMSIDQSTHS
VFGASKVAAD VMVQEYGRNF GLATGSFRGG CLTGSGHSGA ELHGFLAYLM KCAMEKRPYT
IFGYKGKQVR DNIHSSDLIH GFWHFFQNPR PGEVYNMGGG MDSNCSMLEA IELCQQITGN
ILDFRYSETN RTGDHIWWIS DLKKFKDHYP QWQLEFNVEH ILREIEGGLK TR
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