Gene Mmc1_2869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2869 
Symbol 
ID4480817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3571860 
End bp3572678 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content53% 
IMG OID639723613 
Productglycosyl transferase family protein 
Protein accessionYP_866767 
Protein GI117926150 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0562178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTTC AGGTGCAATA CCGTAAGGAG TGGGAGGAAG CAGGGATTAC GGACATGCTC 
TCTGTGATCA TTCCCACCCA TAATGAGGAA GGGTGCATTC AATCCACGGT GGAAAAGCTG
ATTGCCGTTC TGCAGGCTGA ATCCATTGCC CATGAAATTC TGGTGATCAA CGATAATAGC
AGCGACCGCA CCGGGGAGAT TCTTGTGGCC ATGACCCCCT ACTGCCCCAC CATGCGGGTC
ATCAACAACA CCCCACCCAA TGGTTTCGGT TTTGCCATTC GTCAGGGCTT GTTGGCCTTC
AATGGCGAAG CGGTGGCCCT CTACATGGCA GATGCCTCTG ACGCCCCGGA GGATCTGGTG
CGCTTTTACC GCAAGCTGCA AGAGGGTTAC GACTGCGTGT TTGGCAACCG CTTCACCAAA
GGTGGCCGGG TCTACAACTA CCCCTGGCCA AAGCTGGTAT TAAACCGGCT GGGCAACCTG
TTTATTCGCC TGTTGCTGCG CACCGGCTAC AACGATACCA GCAACGCCTT TAAGCTTTAT
CGCCGCCATG TGATTGCCGG GCTGCATCCG CTGCTCTCCT ATCAGTTCAA CATCACCATT
GAACTGCCCC TTAAAGCGAT CATCCGGGGC TACAGCTTTG CGGTTGTTCC CAACTCCTGG
GAGAACCGCA GCCATGGCAT CTCCAAATTT AAAATCAAGG AGATGGGATC CCGCTACCTG
TTCATCGTGT TTTACTGCCT GATTGAAAAG ATTTTCATGC AGGGAGAGTT CTCCAATCTG
CCGACTGAAT CCGAACAGTG CCAAAATTGG ACTAAGTGA
 
Protein sequence
MPVQVQYRKE WEEAGITDML SVIIPTHNEE GCIQSTVEKL IAVLQAESIA HEILVINDNS 
SDRTGEILVA MTPYCPTMRV INNTPPNGFG FAIRQGLLAF NGEAVALYMA DASDAPEDLV
RFYRKLQEGY DCVFGNRFTK GGRVYNYPWP KLVLNRLGNL FIRLLLRTGY NDTSNAFKLY
RRHVIAGLHP LLSYQFNITI ELPLKAIIRG YSFAVVPNSW ENRSHGISKF KIKEMGSRYL
FIVFYCLIEK IFMQGEFSNL PTESEQCQNW TK