Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2864 |
Symbol | |
ID | 4480812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3566990 |
End bp | 3568015 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639723609 |
Product | integrase catalytic subunit |
Protein accession | YP_866763 |
Protein GI | 117926146 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0591459 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAGCA CATTAACAGA ACTCATCCAC ATCATCACGG GATTGTTCAG GTCTAGTGCA GCCCTACAAC TGGAGATTCT GGCTCTTCGC CACCAAATCA ATATTCTTCA ACGACAAAAA CCAAAGCGGC CAACGTTTTC ACGTCGGGAT AAGTTGTTCT GGGTCTGGCT TTCTCGGCGG TGGTCGGGTT GGAAGAGTGC CCTCGTGATC ATTAAGCCAG CAACCGTGGT CAAGTGGCAC AAACAGGGCT TTAAGCTCTA CTGGAAATGG AAATCGCAAC CTAAACGCCC TGGTCGTCCT CGTATTCCGA AGGAGGTGCG TGATCTGATC CGTAAGATGA GTCGGGAGAA TCCACTTTGG GGTGCACCAC GCATACATGG TGAGTTACTG AAATTGGGCT ACGATATAGG AGAGACATCA GTCTCAAAGT ACATGCTCAA ACCTGACAAG CCCCCTTCAC AGACCTGGAG GACCTTCCTT GATAACCACG TAAATCAGAT CGTGGCCATG GACTTCTTCA CCATACCGAC AATCTTTTTC AAGGTGCTGC ACGTCCTCAT TCTGATCGAC CACGATCGCC GCCGGATTAT CCATTTCAAT GTTACAACCA ATCCAACGTC AGCTTGGGTG GTTCAACAAA TCTGCGAAGC GTTTCCCTGG GATTCAGCCC CGCGTTTCCT GCTGCATGAT CGCGATCCAC TCTTCATGGC CAGTCAGCAC TCACTCAAAG CCATGGGGAT CGAAACGCTG ATCACAGCCC CAGGATCGCC TTGGCAAAAT GCCATCGCAG AACGGATGAT CGGTAGTTGT CGTAGAGAGT GCTTTGACCA CATCATCGTG CTCAACGAAG AACACCTGCG ACAGCGGCTT GGGGAGTATG TGGATTATTA CCACCAGCGG ACCCATTTGG GTTTGGCCAA AGATTCCCCG GTTCACCGTC CGATTCAGCA CAAAGAGTCA GGCGACGTTA TCGTATTCCC TGTTCTCGGC GGTCTGCACC ACCGATACGA ACGCATCGCT GCCTGA
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Protein sequence | MLSTLTELIH IITGLFRSSA ALQLEILALR HQINILQRQK PKRPTFSRRD KLFWVWLSRR WSGWKSALVI IKPATVVKWH KQGFKLYWKW KSQPKRPGRP RIPKEVRDLI RKMSRENPLW GAPRIHGELL KLGYDIGETS VSKYMLKPDK PPSQTWRTFL DNHVNQIVAM DFFTIPTIFF KVLHVLILID HDRRRIIHFN VTTNPTSAWV VQQICEAFPW DSAPRFLLHD RDPLFMASQH SLKAMGIETL ITAPGSPWQN AIAERMIGSC RRECFDHIIV LNEEHLRQRL GEYVDYYHQR THLGLAKDSP VHRPIQHKES GDVIVFPVLG GLHHRYERIA A
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