Gene Mmc1_2848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2848 
Symbol 
ID4484099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3553059 
End bp3553961 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content59% 
IMG OID639723593 
Producthypothetical protein 
Protein accessionYP_866747 
Protein GI117926130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.357986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCC TCCCCATCAT CAGCGCCGAC CAGCGCATGG CAGAGCAACG GGGCATCAAG 
GGGGTAATTC TAGGCCCCAG CGGCATTGGC AAGACATCTT TGCTGTGGTC CGTCGATCCG
AATTCCACCC TGTTTTTTGA CCTAGAGGCC GGCGACCTGG CCGTGGAGGG GTGGCCCGGG
GATACCATCC GCCCACGCAC CTGGGACGAG TGCCGCAACT TTGCAGTGTT CATTGGCGGC
CCCAACCCTG CGCTGAGGGA TGATCAGCAC TACAGTCAGG CGCACTACAA CGCTGTTTTA
CAGAAGTATG GCGACCCCGG GGTCATGGCC AAGTACCAGA GCATTTTCGT GGACAGCATC
ACCGTGGCTG GACGGCTCTG CTTCCAATGG TGCAAGGGAC AGCCCCAGGC GTTCTCGGAG
AAAACCGGAA AACCAGATTT GCGGGGCGCT TACGGGCTGC ACGGCCAGGA GATGATCGCC
TGGATCACCC ACCTCCAGCA TACCCGGGGC AAGAACGTCT GGTTCGTCGG CATCCTTGAT
GAGAAGACCG ACGACTTCAA TCGGCGTTAC TACACCCCGC AGATTGAAGG ATCAAAAACC
GGTCTGGAAC TGCCCGGTAT TGTAGATCAG GTGATCAGCA TGGTGGAGGT CAAACCCGAG
GAGGGTCCGT CTTATCGAGC CTTCATCTGC CAGACACTCA ATCCATGGGG ATACCCGGCT
AAAGACAGAA GTGGTCGCCT CACCATGGTG GAGGAGCCCC ATCTGGGTCG CCTCATGGAG
AAAATACATC AACCCGGCAA ACCGGCAGCG GAAAGGCTTA GCTTCGAACG CCCTGAGAAA
GTGACCGAAG CCGCCCCCGC CACCGGCGCC CCCGTCGACA TGGCAATGAA CACAGGAGCA
TGA
 
Protein sequence
MSGLPIISAD QRMAEQRGIK GVILGPSGIG KTSLLWSVDP NSTLFFDLEA GDLAVEGWPG 
DTIRPRTWDE CRNFAVFIGG PNPALRDDQH YSQAHYNAVL QKYGDPGVMA KYQSIFVDSI
TVAGRLCFQW CKGQPQAFSE KTGKPDLRGA YGLHGQEMIA WITHLQHTRG KNVWFVGILD
EKTDDFNRRY YTPQIEGSKT GLELPGIVDQ VISMVEVKPE EGPSYRAFIC QTLNPWGYPA
KDRSGRLTMV EEPHLGRLME KIHQPGKPAA ERLSFERPEK VTEAAPATGA PVDMAMNTGA