Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2845 |
Symbol | |
ID | 4484096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3550056 |
End bp | 3551738 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639723590 |
Product | type III restriction enzyme, res subunit |
Protein accession | YP_866744 |
Protein GI | 117926127 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.651077 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCTTC GCCCTCGACA GGAGACTTTT GTCCGCAGAT CGGTCGATGC CCTTTACGAA CATGGTGACA CATTGGCTGT TGGTCCTACC GGCATGGGCA AGAGCATATG CCTTTCAGCT GTTGTTGGTC GTGTGATTTC CAAAAGTGGT GGGAAAGCCT GTGTCTTGGC TCATCGGGAC GAACTTACCC AGCAGAATGT GATGAAATTC ACTAAGGTTA ATCCAGGGCT TTCCACCTCT GTAGTGGATG CCCGTGGCAA ATCGTGGCGC GGGCGCGCCA CCTTTGCCAT GGTGCCCACT CTTGCCCGGC AGAAAAATCT GGATGCCATG CCAGATCTGG ATTTGCTGGT AATTGATGAG GCCCACCATG CGGTGGCCAA CAGTTACACC CGCATTATTG ATTCGGCTAG AGGAATAAAC CCAAACTGCA TGATTTATGG TCTGACTGCC ACCAGTGGTC GTGGTGATAA AAAGGCTCTC AGACCGATCT TTTCTAATGT TGCTGACCAA GTGCGGCTTG GAGAATTGAT CCAGTCTGGC CATCTGGTTA AACCCCGTAC ATTCGTTGTC GATGTAGGCA CTCAGGATGC GTTGAAAAGC GTACGGAAGA CAGCAGACGA CTTTGATATG GCCGAGGTGT CCCAGATCAT GAACAAGGCC CCGGTCACCG AGGCTGTCAT CAAACATTGG AAGGAAAAAG CCGGCACCCG AAAGACCATC GTATTCTGCT CCACCGTGGA TCATGCCCAG AACGTCACAG ATGCTTTCAA CAATGCGGAT GTTGAAGCCG TGATGATTCA TGGCGAGCTG TCCCCGGCAG AACGGAAAGC CAACCTGGCC CGATTCGAAA AAGGCTCAGC CATGGTAGTG GTCAACGTGG CTGTGTTGAC TGAGGGCTAC GATCATCCAC CTACATCCTG CGTAGTTCTG CTTCGGCCAA GCTCGTACAA ATCCACCATG ATCCAGATGG TGGGACGCGG GCTGCGCACC GTAGATCCTG CCCTGTTTCC TGGGCTGGTC AAGACCGACT GTATTGTCCT GGATTTCGGC ACTTCATCTA TCCTTCACGG CTCCCTGGAG CAGGACGTTA ACCTGGATGG AAAGGAGATC CTGGGAGCGG CTCCCACCAA GGAGTGTCCC GAATGTCAGG CTATCGTGCC CTTGGCAGTC AGGGAGTGCT CTCTTTGTGG GTATGTGTGG GAATCGGAAG TTACTGGAGA AGGGCCGGAA TCCATCACCG ACTTCATCAT GTCCGAGGTG GACCTGCTCA AACGCTCCAG CTTCCGCTGG GTTGACCTGT TCGGAGATGA TGCCGCCATG GTGGCCAACG GCTTCCACGC CTGGGGTGGG ATCTTCTTCC TCAATGGCAA CTGGCACGCT GTGGGTGGAG CCAAGGGCCA GCCCACCAAG TTGCTCTCTA TCGGTGAACG TACCATCTGT CTTGCTGCCG CCGATGACTG GCTCAATGAG AGCGAAACCG ATGAGTCGGC ACATAAAACC AAATCCTGGC TCAACCAACC CCCAACGGAT AAGCAGCTTC AATATCTGCC ACCAGCCATG CGCATGGATA TGGGGCTGAC CCGTTACCAC GCATCAGCGC TGCTGACCTT CCGTTTCAAT AAAGCTGCCA TTCGCAGTTT GATATTTGAA GCGGACCGAC AGGCGCTGGC GGAGGTGGCG TGA
|
Protein sequence | MILRPRQETF VRRSVDALYE HGDTLAVGPT GMGKSICLSA VVGRVISKSG GKACVLAHRD ELTQQNVMKF TKVNPGLSTS VVDARGKSWR GRATFAMVPT LARQKNLDAM PDLDLLVIDE AHHAVANSYT RIIDSARGIN PNCMIYGLTA TSGRGDKKAL RPIFSNVADQ VRLGELIQSG HLVKPRTFVV DVGTQDALKS VRKTADDFDM AEVSQIMNKA PVTEAVIKHW KEKAGTRKTI VFCSTVDHAQ NVTDAFNNAD VEAVMIHGEL SPAERKANLA RFEKGSAMVV VNVAVLTEGY DHPPTSCVVL LRPSSYKSTM IQMVGRGLRT VDPALFPGLV KTDCIVLDFG TSSILHGSLE QDVNLDGKEI LGAAPTKECP ECQAIVPLAV RECSLCGYVW ESEVTGEGPE SITDFIMSEV DLLKRSSFRW VDLFGDDAAM VANGFHAWGG IFFLNGNWHA VGGAKGQPTK LLSIGERTIC LAAADDWLNE SETDESAHKT KSWLNQPPTD KQLQYLPPAM RMDMGLTRYH ASALLTFRFN KAAIRSLIFE ADRQALAEVA
|
| |