Gene Mmc1_2840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2840 
Symbol 
ID4484091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3545133 
End bp3545633 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content59% 
IMG OID639723585 
Producthypothetical protein 
Protein accessionYP_866739 
Protein GI117926122 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.378357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTC AGAGTTTGCC CCATCGGGGC ACAGATGAAA ACAGGACAGT GTTGGCCCTG 
GATCTTGGTA CCCAGTTGGG GTGGGCGCTG CACCACCCCG ATGGGACCAT CACCAGCGGC
ACGGTGTCGT TCAAGCTGGG CAGGTTTGAA GGGGGCGGTA TGCAGTGGGT CAGGTTCAAA
GCCTGGCTAG ATGAGATGCA CTTCACCAGC GATGTAGGAC AGATCCTGTT TGAGGAGGTG
CGCAGGCATA TCGGAACGAC AGCAGCCCAT GTGTATGGCG GGTTCCTGGC CCATCTCACA
GCCTGGGCAG AGCACCACGA GGTGCCCTAC ATGGGGGTAC CCGTGGGCAG CATCAAAAAA
TCTGCTACGG GCAAAGGCAA CGCCAGCAAG GAGCAGGTTA TCCATGCCAT GAAGCATCTG
GGCTATGCTC CGGAGGATGA CAACGAGGCC GACGCTTTGG CCCTGCTGCA TTGGCAGATC
GACCAGGGAG GTGCGCGATG A
 
Protein sequence
MATQSLPHRG TDENRTVLAL DLGTQLGWAL HHPDGTITSG TVSFKLGRFE GGGMQWVRFK 
AWLDEMHFTS DVGQILFEEV RRHIGTTAAH VYGGFLAHLT AWAEHHEVPY MGVPVGSIKK
SATGKGNASK EQVIHAMKHL GYAPEDDNEA DALALLHWQI DQGGAR