Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2835 |
Symbol | |
ID | 4483001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3541711 |
End bp | 3542400 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639723580 |
Product | deoxyribonuclease I |
Protein accession | YP_866734 |
Protein GI | 117926117 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.667244 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCT CGGCCATCGC CCAAGCTGCT GATCCTCAAA TCCCCCATCG CATTGCTTCG TTCAGCGAAG CTAAAAAGCT TCTCCCCAAA GTCTTTGAAG GCCACCGCAC TACATTTTAC TGCGGCTGTA GCTATACCAA GCATAAGGAA GTTCGGTCGG GAGCATGCGG CTATCAGCCC CGCAAAAATC CTAAGCGGGG TAGTCGCATT GAATGGGAAC ACGTTGTTCC TGCTCACGCC TTTGGCCATA CCCGTCAGTG CTGGCGAGAG CCAATCTGTA CAACCAAAAA AAGCAAAGCT TACAAAGGCC GTAGATGCTG CGCCAAGGTT GATCCCGTCT TTGAAGCGAT GGAGTCTGAT CTCCACAATC TGGTCCCTGC AGTAGGCGAA CTCAACGGCG ACCGCAGCAA CCGGTCATTT TCTATGGTCG CAGGTGAGCC CAGAGCCTAC GGAGCCTGTG ATTTTGAGAT CGACTGGGAC ACCGACCGTG TTGAGCCCCG CCCCGAAGTG CGTGGTGATA TTGCTCGGAC CTATTTCTAC ATGAATGCCT CATACGGGCT GCCAATCAGC AAAAAGCAGA GGCGGCTCTT TGACGTTTGG AACAGGGAAG ATCCAGTCGA TGACTGGGAA CGTGAACGGA ATCGTAGGAT AGAACGGATA CAGGGTAACG CAAATCCCTT TATCCAGTAG
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Protein sequence | MTISAIAQAA DPQIPHRIAS FSEAKKLLPK VFEGHRTTFY CGCSYTKHKE VRSGACGYQP RKNPKRGSRI EWEHVVPAHA FGHTRQCWRE PICTTKKSKA YKGRRCCAKV DPVFEAMESD LHNLVPAVGE LNGDRSNRSF SMVAGEPRAY GACDFEIDWD TDRVEPRPEV RGDIARTYFY MNASYGLPIS KKQRRLFDVW NREDPVDDWE RERNRRIERI QGNANPFIQ
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