Gene Mmc1_2835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2835 
Symbol 
ID4483001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3541711 
End bp3542400 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content53% 
IMG OID639723580 
Productdeoxyribonuclease I 
Protein accessionYP_866734 
Protein GI117926117 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.667244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCT CGGCCATCGC CCAAGCTGCT GATCCTCAAA TCCCCCATCG CATTGCTTCG 
TTCAGCGAAG CTAAAAAGCT TCTCCCCAAA GTCTTTGAAG GCCACCGCAC TACATTTTAC
TGCGGCTGTA GCTATACCAA GCATAAGGAA GTTCGGTCGG GAGCATGCGG CTATCAGCCC
CGCAAAAATC CTAAGCGGGG TAGTCGCATT GAATGGGAAC ACGTTGTTCC TGCTCACGCC
TTTGGCCATA CCCGTCAGTG CTGGCGAGAG CCAATCTGTA CAACCAAAAA AAGCAAAGCT
TACAAAGGCC GTAGATGCTG CGCCAAGGTT GATCCCGTCT TTGAAGCGAT GGAGTCTGAT
CTCCACAATC TGGTCCCTGC AGTAGGCGAA CTCAACGGCG ACCGCAGCAA CCGGTCATTT
TCTATGGTCG CAGGTGAGCC CAGAGCCTAC GGAGCCTGTG ATTTTGAGAT CGACTGGGAC
ACCGACCGTG TTGAGCCCCG CCCCGAAGTG CGTGGTGATA TTGCTCGGAC CTATTTCTAC
ATGAATGCCT CATACGGGCT GCCAATCAGC AAAAAGCAGA GGCGGCTCTT TGACGTTTGG
AACAGGGAAG ATCCAGTCGA TGACTGGGAA CGTGAACGGA ATCGTAGGAT AGAACGGATA
CAGGGTAACG CAAATCCCTT TATCCAGTAG
 
Protein sequence
MTISAIAQAA DPQIPHRIAS FSEAKKLLPK VFEGHRTTFY CGCSYTKHKE VRSGACGYQP 
RKNPKRGSRI EWEHVVPAHA FGHTRQCWRE PICTTKKSKA YKGRRCCAKV DPVFEAMESD
LHNLVPAVGE LNGDRSNRSF SMVAGEPRAY GACDFEIDWD TDRVEPRPEV RGDIARTYFY
MNASYGLPIS KKQRRLFDVW NREDPVDDWE RERNRRIERI QGNANPFIQ