| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2825 |
|---|
| Symbol | |
|---|
| ID | 4482991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3534266 |
|---|
| End bp | 3535612 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639723570 |
|---|
| Product | nuclease |
|---|
| Protein accession | YP_866724 |
|---|
| Protein GI | 117926107 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0863] DNA modification methylase
[COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAGA TCCCTGCCAT GGCCGAACGG ATTGAACTGT GGCCAACGGA TCGGCTGTTG
CCCTATGCGG GCAACGCCCG TACCCACAGT GATGAGCAGG TCGCCAAGGT GGCGGCCAGC
ATGGTGGAGT TTGGCTTTAC CAACCCCATC CTGGTGGACG GTAAGGATGG CATCATTGCC
GGTCACTGCC GTCTCTCTGC CGCCCAGCGC ATTGGCCTAG CACAGGTGCC AGTTGTGGTG
TTGGATCATC TCTCTGATGC TCAGCGCCGT GCCTATATCC TGGCGGACAA TAGGCTGGCG
CTGGATGGTG GCTGGGATGA GTCGATCCTG GCGGCAGAGC TTGCTCGGCT TCAGGAGGAT
GAATTCAATC TCTCCCTGGT GGGATTCACC GATGAAGAGA TGCGGGACCT GCTGGACGGC
TTTGCAGATG ATATGGATGG TGATGGCAGT GGGACTGCTG CGGGGGCCGA TGAGGTAGTT
CCTGAGCCTC CAGCCAACCC GGTTTCCAAA ACCGGGGATC TGTGGATCCT TGGGGAGCAT
CGCCTCCTAT GCGGTAGCAG CCTCAATCCC GATGATGTGA TTCGGTTGAT GAACGGTGAG
CGGGCCATCC TCTTCGCCAC GGATCCTCCC TATCTGGTGG ATTACGATGG TACCAATCAT
CCCGGTTCCA AAGAGAGCCG TAAGCGGGAA TCCCTCAATA AGGACTGGTC GGATAGCTAC
GGCGTGACTT GGGATGACTC CTCCCAAGGG CCTGAGCTCT ATGAGGGGTT TATCCGCGCC
GCCATCGACC ACGCCATTGA GCCCAACGCG GCTTGGTACT GCTGGCATGC ATCTAAACGG
CAGGCAATGC TGGAAGCGGT ATGGGAAAAG ATGGGTGCCT TTCAGCACCA GCAGATCATC
TGGAACAAGG AGAAAGGTGT CCTCACCCGC TCCAAGTACC TGTGGAAGCA CGAGCCCTGC
TTGATGGGCT GGATCAAGGG CAACATGCCG CCCAAGATCA ACGGCGCCGA GTTCCTTTCC
ACCGTCTGGG ACATTCGTGG GCTCTCCGGT GAGGAGCGAC CTGACCATCC CACGCCCAAA
CCACTGGACT GTTTCGCCAT TCCCATGCGT CAGCATGTGG AACGAGGCGG CCTCTGCTAC
GAGCCCTTCA GCGGATCTGG TTCCCAGATC ATGGCCGGGG AGATGACTGG GCGGAGGGTG
CATGCCATGG AGATCTCACC GGTCTATGTG GATGTGGCGG TAAAGCGGTT CATTCAAGCC
ACGGGGAAGA TCGTCTACCT GGATGGTTCC GGCGGGGAAA GTTTTGATGA GATCGCCGCC
CAGCGCGGTA TCGATCTGGA CCCCTGA
|
|---|
| Protein sequence | MNEIPAMAER IELWPTDRLL PYAGNARTHS DEQVAKVAAS MVEFGFTNPI LVDGKDGIIA
GHCRLSAAQR IGLAQVPVVV LDHLSDAQRR AYILADNRLA LDGGWDESIL AAELARLQED
EFNLSLVGFT DEEMRDLLDG FADDMDGDGS GTAAGADEVV PEPPANPVSK TGDLWILGEH
RLLCGSSLNP DDVIRLMNGE RAILFATDPP YLVDYDGTNH PGSKESRKRE SLNKDWSDSY
GVTWDDSSQG PELYEGFIRA AIDHAIEPNA AWYCWHASKR QAMLEAVWEK MGAFQHQQII
WNKEKGVLTR SKYLWKHEPC LMGWIKGNMP PKINGAEFLS TVWDIRGLSG EERPDHPTPK
PLDCFAIPMR QHVERGGLCY EPFSGSGSQI MAGEMTGRRV HAMEISPVYV DVAVKRFIQA
TGKIVYLDGS GGESFDEIAA QRGIDLDP
|
|---|
| |