Gene Mmc1_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2789 
Symbol 
ID4482726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3501954 
End bp3502859 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content61% 
IMG OID639723534 
Producttransposase, IS4 family protein 
Protein accessionYP_866688 
Protein GI117926071 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGG GGCATGGGAG CGGTAAGCGT CGCTATCGGG TGCGGAACTG GTCAGCCTAT 
CACGACGCGC TGGTGAAACG AGGTCGGCTG ACTCTGTGGT TTGATGAAGA GGCGATCGCT
GGGTGGCATG TAAAGGAGCC GCCCAAGAAG CGCGGTGGGG TTTCGGTCTA CACGGATACC
GCCATCCTGT GCGGCTTGAC GCTGCGGGTA TTGTTCAAGC TTCCGCTACG GGCGCTGCAA
GGGTTGGTTG GCTCCGTGAT TGATATGCTG GGGCTGCCCT TGCTGACGCC GGATTACAGC
ACATTCTGCC GCCGGCAGAA GGGCCTGAAT GTTCCGTTGC CGCGCCAGGG TAAGCGGAAG
CCGCTGCACA TGGTGGTTGA TTCCACAGGG CTGAAGGTGT TCGGTGAAGG GGAATGGAAG
GTGCGCCAGC ACGGCTGGTC GAAGCGGCGG ACCTGGCGCA AGCTGCATCT TGGCGTGAAC
GAAGCCAGCG GTGAACTGGT GGCGGCGACG TTGACCGCCA ACGATAAGGG CGATAGCGAG
ATGTTGCCTG ACCTGTTGGA TCAGTGTGCG GATGATCTGG TCCAGGTTTC AGGCGATGGC
GGCTACGATA CGTGGAGATG CTATGAGGCC ATCGCCGCGA GGGGAGCGCG AGCGGCGATT
CCACCGCAAC GCAACGCCAA AATAAAGCAG CACGGCAACC GCCATGCACC GCCGCTTCCA
CGCGATGAGG CGTTGCGTCG GATTAGACAG GTCGGGCGAA CTCAGTGGAA AAGGGAGAGC
GGCTATCACA GACGAAGCTT GGCAGAGACC GCCGTGGCCC GGATCAAGGG GATCTTCGGC
GGCGCGTTGA TGGCCGCCTG TTCGAGAATC AGAAGGGCGA GGCTATGGCC CGCTGTCGGA
CTCTGA
 
Protein sequence
MMKGHGSGKR RYRVRNWSAY HDALVKRGRL TLWFDEEAIA GWHVKEPPKK RGGVSVYTDT 
AILCGLTLRV LFKLPLRALQ GLVGSVIDML GLPLLTPDYS TFCRRQKGLN VPLPRQGKRK
PLHMVVDSTG LKVFGEGEWK VRQHGWSKRR TWRKLHLGVN EASGELVAAT LTANDKGDSE
MLPDLLDQCA DDLVQVSGDG GYDTWRCYEA IAARGARAAI PPQRNAKIKQ HGNRHAPPLP
RDEALRRIRQ VGRTQWKRES GYHRRSLAET AVARIKGIFG GALMAACSRI RRARLWPAVG
L