Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2766 |
Symbol | |
ID | 4483905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3479913 |
End bp | 3482075 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639723511 |
Product | TOPRIM domain-containing protein |
Protein accession | YP_866665 |
Protein GI | 117926048 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.172125 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATT GGACTCCATA TCTCGATTTC AATGATGCGG GTGGACAGCA GGAGTTTTCC TCTGTTGCAG AACAGCATCA TGAAAAGGAG GAGATAAAAG CACGTTTGCA GAGCCAGATT GAGTCGGTGC TGTATCACCT TTTGCCTGCC GGGAAGGTTC GTCATGGGCA GTTCTTCATC GGAGATGTGG AGGGCAACCC CGGTGAGAGC ATGAAGGTTG AGCTGACGGG AGAAAAGGCC GGGGTCTGGT ATGACCATGC TGCGGGTTCG GGTGGCGACA TCCTGGACCT GTGGGCCCGG TCACGAGGCA TGGACACCCG CACCCAGTTC CGTGACGTCA TGGATGATGT GCGCGGCTGG CTGGGAGAGT CCGTGAGATT ACCACCTGTA TCGATGCAAC CCACTCAACG GCGTGAACCC CCCATGGATG AGTTGGGGCC CCATACCGGT AAGTGGGACT ATTTCGATAC CAATGGCCAA CTACTGGTCT GTGTCTACCG TTACGATCCT CCGGGCCGCC GAAAGGAGTT TCGGCCCCTG GATGTGCGCA CCGGCAAGTG GCAGTCGCCA GCGGTGACGC CCCTCTACAA CCTACCTGGA ATCATGCAAG CCGCTGAGGT GGTGCTGGTC GAAGGGGAAA AGAGCGCCCA GGCGCTCATC GATGCGGGAA TCCCGGCGAC CACATCTCTA GGCTCCAAAG GGCAGATCAA CCGCGCTGAT TGGAGCATTC TCCAGGGTAA ACGGGTAATC ATCTGGCCCG ACCGAGACAA GGCAGGATGG GAGTACGCCC AATTGGCATC ACAGGCAGCC AGAAACGCGG GCGTTCGGGA AGTGTCCATT CTCACACCGC CAGAGGGAAA ATCTGAAAAA TGGGATGCTG CTGATGCCGT GGCTGAGGGG ATGGATGTGC GTGCGTTTAT ACACCACGCA CTTCGACAGG AGCCAAAAGG TAGAAAACGT CGCATCCGAT TGATGGATTG GACGCTGGAT CGCTATGAGG GGCCACCCCC TCATCGTGAA TGGCTGATAG AAGGCGTTCT GCCACTGGGG GTGCCCGGTA TGTTTGCAGC CATTGGTGGC GCAGGGAAAA GCATGCTGTT AATGGATCTG GCTGCCAAAG TGGCGCTTTC CGAAAGTGGA AACCCCATCC CGCTGGAAGC GCTTGGTGGT CCGATAGTGC CTGCAACCGG CACCGCTGTC ATGCTAACCG CAGAGGATGA TCACGCAGAG GTGCATAGAC GTCTCTTTGA GGTGTTACCA GGACGGCCCA ATCCCAAACG GCTGATTATT GTGCCCATGC CCAATGCGGG CGGTACGTTG CCGCTGATAA GCATGAGTCG TGAGGGACCA ATCCTGTCGG AAGAGTTTCA TGACATTAGG GAGGAGCTTT TGGAGATCCC CAACCTCCGG CTGGTGGTCA TTGATCCGCT GCAGAACTTT GCAGGGGGTG ATGTTAACAG TGACCCCGCC GCTGGGGCGC TCTTCTTTTC TGGTTTGGGA CGTATCGCTG CCGAGACCGG TGCTACCGTA CTGGCAACAC ACCATTTCAA GAAAAACAGT GGTAAGACCA TCGGAACTGC TGCAGAGGCG CGAGAGGCCA TTCGTGGCAC CACGGCGCTT GTCGATAGCG GTCGGTGGTC CTATGCCCTC TGGGAGGTTG AGGATTCTGA AGCCAAAAAG GTTTGTAAAC TGATTGGCCA GCGCTTTCAG AGAGAGAGTG TCTACCGAGG CGCTGTTGTA AAGAGCAACT GGCCTACAGA CAAGACGGTA CGGATCTATG CCCGTAATCC CAACAGTGGG CTCTTGTCTG ACCGGACGAT GGATCTTGAG CGACTGGGAT CAAAGCAGCC TGAGCTGATG GATCTATTGG TTACAGCCGT GGGAAACGCT GCATCTGGTG GGCAGCCATA TACCAAAACA GGGGGCAACG GGCTCTACGA ACGGCGCTCA GAGTTGCCAG ATGATCTGCG CAGCGTCGGA AGAGACAGGT TGGTGCATAT GACTGACCTG CTACTACAGC TGGGGAAAAT TGTTCTCTGC GTTGCTGGGG ACAGCAAATT GAAAAAATAC CTGGATGTTC CCGATGGTGA ATTTGCTGTT GGCGTCGGCC AATTTCAGGT CGGTGCGGGC TCCCAGAGTC ACAGCATACA GGGGGGTGAA TAG
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Protein sequence | MNNWTPYLDF NDAGGQQEFS SVAEQHHEKE EIKARLQSQI ESVLYHLLPA GKVRHGQFFI GDVEGNPGES MKVELTGEKA GVWYDHAAGS GGDILDLWAR SRGMDTRTQF RDVMDDVRGW LGESVRLPPV SMQPTQRREP PMDELGPHTG KWDYFDTNGQ LLVCVYRYDP PGRRKEFRPL DVRTGKWQSP AVTPLYNLPG IMQAAEVVLV EGEKSAQALI DAGIPATTSL GSKGQINRAD WSILQGKRVI IWPDRDKAGW EYAQLASQAA RNAGVREVSI LTPPEGKSEK WDAADAVAEG MDVRAFIHHA LRQEPKGRKR RIRLMDWTLD RYEGPPPHRE WLIEGVLPLG VPGMFAAIGG AGKSMLLMDL AAKVALSESG NPIPLEALGG PIVPATGTAV MLTAEDDHAE VHRRLFEVLP GRPNPKRLII VPMPNAGGTL PLISMSREGP ILSEEFHDIR EELLEIPNLR LVVIDPLQNF AGGDVNSDPA AGALFFSGLG RIAAETGATV LATHHFKKNS GKTIGTAAEA REAIRGTTAL VDSGRWSYAL WEVEDSEAKK VCKLIGQRFQ RESVYRGAVV KSNWPTDKTV RIYARNPNSG LLSDRTMDLE RLGSKQPELM DLLVTAVGNA ASGGQPYTKT GGNGLYERRS ELPDDLRSVG RDRLVHMTDL LLQLGKIVLC VAGDSKLKKY LDVPDGEFAV GVGQFQVGAG SQSHSIQGGE
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