| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2733 |
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| Symbol | |
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| ID | 4482585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3456364 |
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| End bp | 3459915 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639723478 |
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| Product | TP901 family phage tail tape measure protein |
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| Protein accession | YP_866632 |
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| Protein GI | 117926015 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5283] Phage-related tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.332181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00107852 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCAGAA CCACGGCGGC GTTGGAGTTT GTCTTACGCG CCAATGATGA TGAACTGCGC
TCTGCGGTCT CACGTATGCA GAGCGACTTC CGTCAGGGCG TGCAGTCCAT GGCCACGGAT
GCTCAGATTC AGGCGCAGCG GATCAATAAG GCTCTGGCTG ACATCGATGC TTTTCGTAAT
CTGAAACGGC AGATCCAGGA GAGCGAAGAT CAATGGCAGG CGGCCACCCG TGAGGTGGCC
CATCTCGCGG TGCAGATGCG GGAGACCGAA ACCCCCACCC GTGCCATGAC CCGCGCTTTT
GAGCAGGCCA AGCGTAATGC CCGTGCTCTT AAGGATCAAG TGGATGCCCA GCGGGAGTCC
CTGCATGGTC TGCGGGGTGA TCTGCGTCAG GCTGGGGTGG ATACCGTCCG TCTTAGTGAA
AGCCAGGAAC GACTTCAACG GGACCTGCGC ACTGCCACCC GTGAGGTTCA AGCGCAGAGC
CGCGTGAACC GCGCCTTTGC CACCATCGGC GTCCGATCCA TGCGGGAGGT AGAGGACGAA
GTCCAGAGGC TAGAGAATGC CTATCGGGAA CTGGCCCGAT CTGGGCGTGT ATCTGCGGCA
GATCTGAATC GAGCTCATCA GCAGATGCAG AGCCGTGTCC GCACCCTGCG CGGTGAGATG
CAGGGGTTGA ATGGTGCCAT GACCGGAATG GTGGGTACCG TGCGCAATCT GGCAGCAGCG
TATGCCGGGT TTGAATCCAT TCGTGCGGCA TCCAACTTTA TCAAAGACTC CATCCTTACC
TATGCCGCCT TTGACGACAC CATGAGGCAG GTGGCGGCTA CATCTGGCGC GACATCAGAA
GAGCTGACCC AACTGACCGA GTTGGCCAAG GAGATGGGAG CCTCTACCCG ATTCAGCGCC
ACTCAGGCAG CGGGTGGTCT CAAAGCCATG TCCCTGGCGG GGCTCTCGGC ATCCCAACAG
CTGCAAGCCC TACCAAAAGT TCTGGAGTTG GCTGCAGCCG GTTCGGTGGA TCTGGAAACC
GCAGCAGGCA TCGCCACCGC CTCTATGGCC CAGTTTGGGT TGCAGGCCCG TGATCTGGGC
AATGTAAACG ACATCCTGGT CACCGCCTTC ACCAACTCCG CCACCAACAT TCAGGATCTA
GGTCTTGCTC TACAGTACGC AGGACCTGTG GCGAAGGCCG CTGGAAACAG CTTTGAAGAG
ACCGCCACCG TGCTGGCCTT GCTGGCCAAG AACGGCTTCT CTGGGGAAAA GGCGGGTACC
GCGCTGCGTA GCGCCTATGC CCGTCTGCTG GCCCCGGTGG ATAAAGCCCA AGAGGCCATC
AACCGTATGG GCCTTCAGAC CCGTGATGCC ACTGGCCAAC TGCTGCCCAT GACGCAAGTG
CTGCGCAACC TGAGGGCAAG CGGGGCCGAT GCCGCCGACA TGATCCAGAT CTTTGGGGTG
GAAGCTGCGC CTGCGTTAAC CGCTGCCGTA GGCATGTCCT CCCAGGCCTT TGAGGCGTTG
GTATCCAAGT TTGAACAGGT GGGCGGTGTC GCCGGGCGTG TGGCCACAGA GATGGAAGCG
GGCATGGGCG GATCCATCCG TTCCCTGGAG TCCGCCTGGG AGGGGGTGAA GATTGCGGTT
GGTGAGGCCA TCGACAAGCA CAGCAGCCTT AATTTTCAAG AGCTCACCGC CGCCATCAAT
GAAAACAAGG ATGCCATCGT CGAGTTGGCT CTGGCTGGTG TGGATCTGGC TGCCATGTTG
GGCCGTGTGG CTCTGATGGT GGGTGAGTTC ATCCTGGCGT GGAAAGAGGT CATCGGCGTG
CTGGGTGGGG CGTATCTGGC CATCAAAACC CTGCGTGTGG CCATGGCAGC ACTCACAGCA
CTTCAGACCG CTCAGTGGTT TCTAACCGTT ACCCGTGCTG CCTCTGGCTT GGTAGCCGTG
GTAGGCGCTC AGGGATTGGT TGGCGCATTG GCGCTGGTCC GCACCCGTCT GCTTTCTCTT
ATCTCAATCA ATCTGGCCGG GTTCTTTATC CGGGGTGCTG CCGCTGTTGG AAGCCTGCTC
GCCGTGCTCA CAGGCCCTGT TGGGCTTATA GCTGGGGCGA CGGCGGCTGT GGGCGCACTA
GGCTACATGG CTTACTCCTG GTTGAAAACC AAGGATGCCC AGGATGAGGC GGCGGAATCC
GGCAAGGCAG CGGTTGAGAC CCAAGAGCAG TTGGCTGCCC GCCTGAAGCA GACCGGGCAG
CAACTGGGGA TCAACATTCC CGACCTGGAG ACCTTCAACC GTCTACAGCG GGAAGGCACC
ATCATTGCCG ACAAAAGCAC CGGGGGTTGG CGACTGGCCG CAAAGGCCGC TTCCGATGCC
ATTCAGACTC AACGTCGCGC GGCCCAAGAA GCCGCCAACC AGCTTTCAAA TCTTACCCGC
CAGCGGACAT CTGCCCAGCG CAAACTGGCG GATCTTGAAC GACAACTGGC CGAAGAGCAG
AAGCGCCAGG CCCGTGAGGT ACTCACCGAG AAGATCCGTA CTGCTGAACA GTCCGTTCAG
GCCACGGAAC GCGCCCTGCA ACAGAGCCTG ACTGCCGAGA AACGACTGGC CGATCAGATC
CAGGGCATCG AAGAGAAAAA GCGCAACGCT CGTATCTCCA CCGAGGACAA AGTGCGCTCG
CTGCTCGAAC GCAACATGTC CGACCGGGAG AAAGAGACTT CCCGCGCTGC AGCCGCTTCC
CAAAAACTGG CTGAGGCTCA GAGGCTTCTT TCCCAAACTA CGCTTTCCGA GCGGGATATC
AAATGGGCCG AATCCCTGGC CCTAGGGGCC CAGGATGCTT TTTCCAGTCT GAATAATACC
TCCACCGCCA TCCGGGGTGT GCAGGATGCC GGGGATGTGC TGGATAAGCT CTATCAGCGC
CAGGAGGAGA GTGCACGAAA AGCACTCTCT ACTCAGAAGG ATCAGACTGC CTCCCTCACC
GAGCAGTTGG AAACAGCACG TGGCCAGGTG GATCTGCTCA AACAGGCTAT GGAAGCCCTT
CCTGACCGGG TCACCAAATC AGTTGAGTTG CAAGCCCAGG TTGAGCAGGC CCGCTCCGCA
CTCTCTACCA TCGAAAAGCA GATGGCGGCG TTAAAAGACA AGACCATCAC CGTAACCGTG
CAAACGGTAG AGGCCAGACA GGCAGGTGGT ATGATCGGTC TGAACCGGGG TGGTCGTCTC
CCCGGCTATG GGGGTGGGGA TCGCATCCAT GCCCTGTTGG AAGCCGGTGA AATTGTCATC
CGCAAAGAGC GTTCACGCAT CTTCAAGGAT CTGCTGTTGA CCATCAACTC CGCCCCCATG
GATACGGTCC GGCGCATCCT GCCCAACCTT CCCAGGTTTC AAACCGGGGG GATGGTGGGA
TTGCCGAAGA TTCCAGCACT TCCGCAACTC TCTTTTGCTG GAGCCGGTGG AAATCAACAG
CCCCCAGTAG AGGGGATCGT TCAGCTTGAT CTGACCATGA ACGGCAGACC AGCCGCCTCC
ATCACCAGCC CCCGGCAACA GGTGCGGCAA CTGGTAGATG CCCTCAAGGA ACTGCAGCGC
GGTACCTTCT GA
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| Protein sequence | MARTTAALEF VLRANDDELR SAVSRMQSDF RQGVQSMATD AQIQAQRINK ALADIDAFRN
LKRQIQESED QWQAATREVA HLAVQMRETE TPTRAMTRAF EQAKRNARAL KDQVDAQRES
LHGLRGDLRQ AGVDTVRLSE SQERLQRDLR TATREVQAQS RVNRAFATIG VRSMREVEDE
VQRLENAYRE LARSGRVSAA DLNRAHQQMQ SRVRTLRGEM QGLNGAMTGM VGTVRNLAAA
YAGFESIRAA SNFIKDSILT YAAFDDTMRQ VAATSGATSE ELTQLTELAK EMGASTRFSA
TQAAGGLKAM SLAGLSASQQ LQALPKVLEL AAAGSVDLET AAGIATASMA QFGLQARDLG
NVNDILVTAF TNSATNIQDL GLALQYAGPV AKAAGNSFEE TATVLALLAK NGFSGEKAGT
ALRSAYARLL APVDKAQEAI NRMGLQTRDA TGQLLPMTQV LRNLRASGAD AADMIQIFGV
EAAPALTAAV GMSSQAFEAL VSKFEQVGGV AGRVATEMEA GMGGSIRSLE SAWEGVKIAV
GEAIDKHSSL NFQELTAAIN ENKDAIVELA LAGVDLAAML GRVALMVGEF ILAWKEVIGV
LGGAYLAIKT LRVAMAALTA LQTAQWFLTV TRAASGLVAV VGAQGLVGAL ALVRTRLLSL
ISINLAGFFI RGAAAVGSLL AVLTGPVGLI AGATAAVGAL GYMAYSWLKT KDAQDEAAES
GKAAVETQEQ LAARLKQTGQ QLGINIPDLE TFNRLQREGT IIADKSTGGW RLAAKAASDA
IQTQRRAAQE AANQLSNLTR QRTSAQRKLA DLERQLAEEQ KRQAREVLTE KIRTAEQSVQ
ATERALQQSL TAEKRLADQI QGIEEKKRNA RISTEDKVRS LLERNMSDRE KETSRAAAAS
QKLAEAQRLL SQTTLSERDI KWAESLALGA QDAFSSLNNT STAIRGVQDA GDVLDKLYQR
QEESARKALS TQKDQTASLT EQLETARGQV DLLKQAMEAL PDRVTKSVEL QAQVEQARSA
LSTIEKQMAA LKDKTITVTV QTVEARQAGG MIGLNRGGRL PGYGGGDRIH ALLEAGEIVI
RKERSRIFKD LLLTINSAPM DTVRRILPNL PRFQTGGMVG LPKIPALPQL SFAGAGGNQQ
PPVEGIVQLD LTMNGRPAAS ITSPRQQVRQ LVDALKELQR GTF
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