Gene Mmc1_2723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2723 
Symbol 
ID4482575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3448368 
End bp3448652 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content58% 
IMG OID639723468 
Producttransposase IS200-family protein 
Protein accessionYP_866622 
Protein GI117926005 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000793006 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTGTCTG GGGTCGTGTC GCCCGACCAT GTGCACATTC TCGTATCGCA CCCACCGCAG 
ATTCCTGTGA GCAAACTGGT GCAGCGGGTG AAAGGGAAGA CCTCGTACAA GATGCAGCGG
GAGTTTCAGG TTTTGCGCAA GCAGTACTGG GGACAGCGGA TGTGGGCGCG TGGGTATTTC
GCATGCACGA CGGGAAACGT GACCGACGAT ATGATCAAGG AGTACATCGA CGGCCACACG
GAGGCGGACG ACAATTTCAA GGTGGCCGAC TTCGAGTCGG AATGA
 
Protein sequence
MLSGVVSPDH VHILVSHPPQ IPVSKLVQRV KGKTSYKMQR EFQVLRKQYW GQRMWARGYF 
ACTTGNVTDD MIKEYIDGHT EADDNFKVAD FESE