| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2722 |
|---|
| Symbol | |
|---|
| ID | 4482574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3447974 |
|---|
| End bp | 3448357 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639723467 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_866621 |
|---|
| Protein GI | 117926004 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000883166 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATC ACATGAAAGC TTCGCTGGTG ACCGACGCCT TGAGGATGGC CTGCTTCAAG
CGAAAGCCCG CGGCAGGCCT GCTGGTTCAT AGCGACCGAG GCAGCCAATA CGCCTCCAAT
CTGTTCAGAA AGCTGTTGCG GGAGAAGGGC TTCACTCAAA GCATGAGCCG ATCTGGGGAT
TGCTGGGACA ATGCGCCTGC CGAGAGCTTC TTCGGCACGC TCAAAACCGA ATTGATCGCA
GATCGCGTTT ACGATTCGCG CCAAGAGGCC GTGCAAGCGA TTTTTGAGTA CATCGAGGTT
TTCTACAACC GACAGAGGAA GCATTCATCA ATCGGCTACA TGACACCTGC TCAGTTTGAC
AAGCAGTGCA AGATTCCCGC TTAA
|
|---|
| Protein sequence | MADHMKASLV TDALRMACFK RKPAAGLLVH SDRGSQYASN LFRKLLREKG FTQSMSRSGD
CWDNAPAESF FGTLKTELIA DRVYDSRQEA VQAIFEYIEV FYNRQRKHSS IGYMTPAQFD
KQCKIPA
|
|---|
| |