| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2719 |
|---|
| Symbol | |
|---|
| ID | 4482571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 3441729 |
|---|
| End bp | 3444626 |
|---|
| Gene Length | 2898 bp |
|---|
| Protein Length | 965 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639723464 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_866618 |
|---|
| Protein GI | 117926001 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1743] Adenine-specific DNA methylase containing a Zn-ribbon |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000742651 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA ACATCAAAGC CCCCAAGAAA CTGATCGAAG TTGCCCTGCC ATTGGACGAC
ATCAACGCGG CAGCAGCGCG GGAGAAGTCC ATCCGGCATG GGCATCCTTC CACATTGCAT
CTGTGGTGGG CGCGGCGGCC GTTGGCGGCG GCAAGGGCGG TTCTGTTCGC GCAGATGGTC
AACGATCCGG GTGGAGAACG AGGCTATTAC GCCGGCAAGA CCAAGGCCCA GGCGGATGCC
GAACGGGAGG AGCTGTTCAA GATCATTCGT GAACTGGTGC TGTGGGAAAA CACCAACAAT
GAGGAGGTGC TGAATAAGGC GCGGGCCGCT ATTCGGAAAT CATGGCGGGA GACCTGTGAG
CTGAACAAGG GCAAGTCAGG ATTCGATCCG GACAAGCTTC CCGCTTTCCA CGATCCATTT
GCCGGTGGTG GGGCCATACC CCTGGAGGCG CAGAGGTTGG GAATGGAGTC TCACGCCTCC
GACCTCAACC CGGTGGCTGT GCTCATCAAT AAGGCGATGA TCGAGATTCC GCCCAAATTT
GCCGGGCGCA AACCAGTGGG GCCGATTCCA GAAGGCGAGA AGCAGGGCCG CATGGAGAGC
GACTGGCCTG GAGCCACTGG ACTGGCCGAG GATGTGCGTC GTTATGGCCA CTGGATGCGG
GAGGAGGCCT TCAAACGCAT TGGTCACCTC TACCCGCAGG TGGAGATCAC CGCCGAGATG
GCCAAGGAAC GGCCAGACCT GAAGGGGATA GTTGGACAGA AACTCACCGT CATTGCCTGG
TTGTGGGCGC GGACGGTAAG AAGTCCGAAC CCTGCCTTTT CTCATATTGC AGTACCGCTG
GTTTCAAGCT TTTTGCTCTC AACCAAGAAA GGCAAGGAAG CCTATATTGA ACCTGTTGTA
GATGCTAATA GCTATTATTT TTCAGTAAAA AAAGGGACTC CGTCGAAAGA TTCTGCTAGG
GGGACTTCGG CTGGTAAACG AGGAGGTTTC CGTTGCATTT TTTCTGACGC GCCAATTGAT
TACAATTATA TCCGTGATGA AGGTTCTGCA GGAAGGATTG GCACCAGGCT AATGGCTATT
GTTGCTGAAG GTGTCCGTGG TCGGATCTAT CTGTCCGCTA CACCTGAACT CGAGATAATT
GCGAATAGTG CAAAGCCTGA GTGGAGTCCA GATGTCAAGC TACATGGTAA ATGCCGAGTC
AACGTTTCTA ATTATGGTTT GGATGTGTAT AGCGATCTCT TTACCCCCCG TCAGTTAGTT
GCTCTGACGA CGTTTTCCAA TCTAGTGCAA GAGGCACGCG TGAAGGCCGT CAATGATGCA
AAAATTACAG GAATGGCCGA TGATGGTATG GGAATAGATG AAGGAGGTTT CGGAGCCGGG
GCTTATGGAG ATGCTGTGGC AGTATATTTG GGATTTATTG TCGATAAAGT TTCTGAAAGT
TTATCAACAA TTTGCACTTG GAGTTCATCT CCTAAAAATG AGCTTATTGT AAGTACGTTC
CGAAGGCAAG CAATACCAAT GACGTGGGAT TTTGGGGAGG CTAACCCCTT CGCAAATTCA
AGCGGGTCGC TTGAGAAAAT TGTCCCTGCG GTTTCAAAAG TTATCAAGAC ATCATTATGT
GGAAGTGTAG ATGGGAATGC TATTCAATTT GACGCCCGAA CGGTTAATCT AAGCGATAGG
GTCGTGTCAA CAGACCCGCC ATACTATGAC AATATTGGCT ATGCAGATTT ATCTGATTTT
TTCTATGTGT GGTCCCGCAG GGCACTTAAA TCAATATTTC CATCTTTATA CTCTACATTG
GCAGTCCCAA AAGCAGAGGA GTTAGTGGCA ACGCCTTACC GTCATGGATC TAAAGAGGAA
GCAGAAGCTT TTTTCATGAA TGGTATGATT TGCGCAATCA ATAATTTCGC AAATCAGGCT
CATCCAAGTT TTCCAGTCAC AATCTACTAC GCTTTCAAAC AGTCAGAAAC AAAGGAAACA
GGTACAACTT CTACTGGTTG GGAAACATTT TTGGAAGCAG TGATTCAGGC TGGGTTCGGT
ATTACTGGCA CTTGGCCGAT GCGGACAGAA CGAGGTGCAC GTTCAATTGG GATTGGAGCA
AACGCTTTAG CTTCCTCTAT TATTTTAGTT TGCCGCAAAA GAGATAATAG TGCCGAATCT
ATCTCCCGCC GTCAGTTTCA ACGGGAGTTG CGCGAAATCT TGCCGGAAGC CTTAGAAACC
ATGATCGGAG GCAAGGAAGG GGCTTCTCCT GTGGCTCCGG TCGATCTGGC TCAGGCATCC
ATCGGCCCTG GTATGGCTGT GTACTCCAAA TACGCGGCTG TACTCAACCA GGACGGCAAT
CCCATGTCCG TGCATGACGC CCTGATCCTT ATCAACCGAG AGATAACTGA CTTCCTGACA
CCAGACTCAG GCAGCTTCGA CAACGACACT CTGTTCTGCT CTACCTGGTT TGACCAGTAT
GGCTGGAAGG CTGGCCCCTT CGGCGAGGCG GACACACTCT CCCGTGCAAA AGGCACCAGT
GTCGATGGGG TTCAGGAAGC CGGTGTTGTC CAATCTGGTG GCGGGAAAGT GCGCCTGTTC
AAATGGGATG AGTACCCGGA CGATTGGGAT CCCAAGAAGG ACAACCGCAC CCCGGTATGG
GAGGCGCTCC ATCATTTGAT CCGCGCCTTG AACAAGGATG GTGAATCCGT CTCCGGCGGT
CTTCTAGCCC GCATGCCCGA ACGCGCCGAG GCCATCCGCC AACTGGCCTA CCACCTCTAC
ACCCTGTGCG AGCGGAAGAA ATGGGCTGAT GACGCCCGGG CCTACAATGA GTTGATCACC
TCTTGGCACG GCATCGCCGC CGCTTCCCAC GAGGTTGGCC ATCTCGGAAC CCAATGCACC
CTGGACCTGG GAGATTGA
|
|---|
| Protein sequence | MSQNIKAPKK LIEVALPLDD INAAAAREKS IRHGHPSTLH LWWARRPLAA ARAVLFAQMV
NDPGGERGYY AGKTKAQADA EREELFKIIR ELVLWENTNN EEVLNKARAA IRKSWRETCE
LNKGKSGFDP DKLPAFHDPF AGGGAIPLEA QRLGMESHAS DLNPVAVLIN KAMIEIPPKF
AGRKPVGPIP EGEKQGRMES DWPGATGLAE DVRRYGHWMR EEAFKRIGHL YPQVEITAEM
AKERPDLKGI VGQKLTVIAW LWARTVRSPN PAFSHIAVPL VSSFLLSTKK GKEAYIEPVV
DANSYYFSVK KGTPSKDSAR GTSAGKRGGF RCIFSDAPID YNYIRDEGSA GRIGTRLMAI
VAEGVRGRIY LSATPELEII ANSAKPEWSP DVKLHGKCRV NVSNYGLDVY SDLFTPRQLV
ALTTFSNLVQ EARVKAVNDA KITGMADDGM GIDEGGFGAG AYGDAVAVYL GFIVDKVSES
LSTICTWSSS PKNELIVSTF RRQAIPMTWD FGEANPFANS SGSLEKIVPA VSKVIKTSLC
GSVDGNAIQF DARTVNLSDR VVSTDPPYYD NIGYADLSDF FYVWSRRALK SIFPSLYSTL
AVPKAEELVA TPYRHGSKEE AEAFFMNGMI CAINNFANQA HPSFPVTIYY AFKQSETKET
GTTSTGWETF LEAVIQAGFG ITGTWPMRTE RGARSIGIGA NALASSIILV CRKRDNSAES
ISRRQFQREL REILPEALET MIGGKEGASP VAPVDLAQAS IGPGMAVYSK YAAVLNQDGN
PMSVHDALIL INREITDFLT PDSGSFDNDT LFCSTWFDQY GWKAGPFGEA DTLSRAKGTS
VDGVQEAGVV QSGGGKVRLF KWDEYPDDWD PKKDNRTPVW EALHHLIRAL NKDGESVSGG
LLARMPERAE AIRQLAYHLY TLCERKKWAD DARAYNELIT SWHGIAAASH EVGHLGTQCT
LDLGD
|
|---|
| |