Gene Mmc1_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2716 
Symbol 
ID4482568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3433938 
End bp3434834 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content55% 
IMG OID639723461 
Producthypothetical protein 
Protein accessionYP_866615 
Protein GI117925998 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00189563 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGAAG AGAAAAAAGC GAAATCCGGG AAAGAGTTGC GCTGGGGTGT AGAGCGCAGA 
ATGGAGTTCA TTGAATTCCG GCTCTTCTGG GAGGGGCGGA TCAATCGGAG AGATCTGATT
GAGAAGTTCG GCGTCTCGGT GCCGCAGGCA TCGGCTGACC TGGGCAAGTA CCAGGAAGTC
GCACCGGAAA ATATCCACTA CGACATCCGA GCGAAGTGCT ACTACCCCGA CAAGGATTTC
AAGCCCAAAT TCCTGAACCC GGATTCCGAT CGCTACCTGG CCAACATGCT CTCGCTCTCC
TCGGGAATTA TGACCGAGGA GGAGTGTTGG CTGTACAGCA TCCCCTCCTA TGACGTGCTG
CCGCAACCAC GTCGTGGTAT TGATCCCATG CGGTTGCGAA AGGTGGTTGG AGCGATCCGG
GAGAAGTTGG CCGTTCAGGT GCGTTATCAG TCCATGAATG CGCCGGAGCC AGAGTGGCGT
TGGATCACAC CCCACGCCTT GGCCTTCGAT GGCTACAGGT GGCATGTGCG AGCATGGTGT
CATCGTGGTG AGGCGTTCAA GGATTTTGTG CTGGCACGGA TTGTCAGCAT TCGCCTGACT
AAGGAACATG ATCTGGATCC GACCGAGGAT GTGGAGTGGC AAGAGTTCAT TGATGTGCGG
ATTGGGCCGC ACCCAAAACT GACTGAGACT CAGCGCATCG CTATCGAGCT GGACTATGGT
ATGGAGAATG GTGAGTTGGT AATTCCGGTG CGGCGTGGGT TCCTCTTCTA CTTCCTCAAG
CGTATGGGGC TGGATATCGA CCCCAACGTT CGCCAGCCTC GGCATCAGCA GATTGTCCTG
CTCAACCAAG AAGAGGTGGA AAAAGCCTAT AGCCTCTCCG AGGAGGGGCA TTCGTGA
 
Protein sequence
MSEEKKAKSG KELRWGVERR MEFIEFRLFW EGRINRRDLI EKFGVSVPQA SADLGKYQEV 
APENIHYDIR AKCYYPDKDF KPKFLNPDSD RYLANMLSLS SGIMTEEECW LYSIPSYDVL
PQPRRGIDPM RLRKVVGAIR EKLAVQVRYQ SMNAPEPEWR WITPHALAFD GYRWHVRAWC
HRGEAFKDFV LARIVSIRLT KEHDLDPTED VEWQEFIDVR IGPHPKLTET QRIAIELDYG
MENGELVIPV RRGFLFYFLK RMGLDIDPNV RQPRHQQIVL LNQEEVEKAY SLSEEGHS