Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2716 |
Symbol | |
ID | 4482568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3433938 |
End bp | 3434834 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639723461 |
Product | hypothetical protein |
Protein accession | YP_866615 |
Protein GI | 117925998 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00189563 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGAAG AGAAAAAAGC GAAATCCGGG AAAGAGTTGC GCTGGGGTGT AGAGCGCAGA ATGGAGTTCA TTGAATTCCG GCTCTTCTGG GAGGGGCGGA TCAATCGGAG AGATCTGATT GAGAAGTTCG GCGTCTCGGT GCCGCAGGCA TCGGCTGACC TGGGCAAGTA CCAGGAAGTC GCACCGGAAA ATATCCACTA CGACATCCGA GCGAAGTGCT ACTACCCCGA CAAGGATTTC AAGCCCAAAT TCCTGAACCC GGATTCCGAT CGCTACCTGG CCAACATGCT CTCGCTCTCC TCGGGAATTA TGACCGAGGA GGAGTGTTGG CTGTACAGCA TCCCCTCCTA TGACGTGCTG CCGCAACCAC GTCGTGGTAT TGATCCCATG CGGTTGCGAA AGGTGGTTGG AGCGATCCGG GAGAAGTTGG CCGTTCAGGT GCGTTATCAG TCCATGAATG CGCCGGAGCC AGAGTGGCGT TGGATCACAC CCCACGCCTT GGCCTTCGAT GGCTACAGGT GGCATGTGCG AGCATGGTGT CATCGTGGTG AGGCGTTCAA GGATTTTGTG CTGGCACGGA TTGTCAGCAT TCGCCTGACT AAGGAACATG ATCTGGATCC GACCGAGGAT GTGGAGTGGC AAGAGTTCAT TGATGTGCGG ATTGGGCCGC ACCCAAAACT GACTGAGACT CAGCGCATCG CTATCGAGCT GGACTATGGT ATGGAGAATG GTGAGTTGGT AATTCCGGTG CGGCGTGGGT TCCTCTTCTA CTTCCTCAAG CGTATGGGGC TGGATATCGA CCCCAACGTT CGCCAGCCTC GGCATCAGCA GATTGTCCTG CTCAACCAAG AAGAGGTGGA AAAAGCCTAT AGCCTCTCCG AGGAGGGGCA TTCGTGA
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Protein sequence | MSEEKKAKSG KELRWGVERR MEFIEFRLFW EGRINRRDLI EKFGVSVPQA SADLGKYQEV APENIHYDIR AKCYYPDKDF KPKFLNPDSD RYLANMLSLS SGIMTEEECW LYSIPSYDVL PQPRRGIDPM RLRKVVGAIR EKLAVQVRYQ SMNAPEPEWR WITPHALAFD GYRWHVRAWC HRGEAFKDFV LARIVSIRLT KEHDLDPTED VEWQEFIDVR IGPHPKLTET QRIAIELDYG MENGELVIPV RRGFLFYFLK RMGLDIDPNV RQPRHQQIVL LNQEEVEKAY SLSEEGHS
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