| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2705 |
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| Symbol | |
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| ID | 4483059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3420616 |
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| End bp | 3422127 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639723450 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_866604 |
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| Protein GI | 117925987 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0443471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGG CAATGCAGAT TAAGGAAGCC CGAGGGGACA ATTCTCCTCG GAGCTTGTGC
AGCCCCGGTT TTAAGAACTG GAACTCCATC GAATGGAAAC AGGTTCACCG AAATGTGTCC
CGACTTCAAG CAAGAATCGT GAAGGCTGAA AAGGAAGGGA GAATCGGCAA AGTCAAAGCT
TTGCAGATCA TTCTGACCAA ATCATTGGCT GCCAGGGCAC TGGCCGTCAA GCGCGTCACG
GAAAACCGGG GGAAGAATAC TCCTGGTGTG GATGGCAGTC TCTGGAAAAC CCCGGGGAGC
AAAGCCAAAG CTGTTCAACA TTTGAGGCGT AAAGGCTACA AGGCCAGCGC CTTGAAAAGA
GTGTACATTC CAAAGGCCAA CGGTAAGAAA CGACCACTCG GGATTCCCAC CATGAGAGAT
AGAGCCATGC AGGCACTGTA TCAAATGGCT CTTGACCCTG TGGCGGAATG CCGTGCTGAT
GTCAACTCCT ATGGATTTCG TAGACATCGC TCGACGGCAG ATGCCATTGA AAAATGTTTT
GCCGTACTAT CCAGGAAATT GGCTGGTCGG TGGGTCCTTG AAGGGGACAT CAAAGGCTGT
TTCGACAACA TCAACCATCA ATGGCTGTTG GATAACATCC CAACAGACAA AAAGATGTTG
AACGCCTGGC TCAAAGCCGG AGTTGTACAC AAAGGAGCCT TCCACGCAAC AGAGGCCGGA
ACACCACAAG GTGGCATCAT TTCACCTGTT TTGGCGAATA TGGCACTCGA TGGGCTCGAA
GATGCCCTTC AGGCTCGATT CGGAAGCAAA ATTTCTCCCC GAAGAAAAGC CTGCCGTATT
AATCTGGTGC GGTATGCGGA TGATTTCATC ATCACCGGAA GTTCACCAGA GCTGCTGGAA
AATGAGGTCA AACCACTGGT GCAGAACTTT TTATCGGAAA GAGGATTGGC TCTTTCCGCT
GAAAAAACCA GTATCACATA CATAACGGAC GGCTTTGATT TCCTTGGCCA AAACATCAGG
AAGTACAGAG ATAAACTCCT GATCAAACCT TCCAGGAAGA GCATTTCGAA TCTCTTGGAA
AAGGTCAGGG AAATCATCAA AAGTCACAAA AGCTCTACAG CCGGTGGATT GATTCTCCTT
CTGAATCCAA TCATCAGGGG GTGGGCGAAT TATCACCGGC ATGTAGTGAG TGGAAGGGTT
TTTGCCCGCG TTGACCATGC AATATGGCAA GCTATCTGGG CCTGGGCAGT CCGAAGACAT
CCCAAGAAAT CGAAAAAGTG GGTCCGCTCA AAATATTTCA CCACGGAAGG GGGAAATAAC
TGGGCATTCT TCGGGGAGAC CTATGCTGGC GTGAGAGTGT TGCTCTTCAA AGCAACATCA
CTCGGCATCA TTCGTCACAT CAAGGTCAGA CAGGATCTCA ATCCCTATGA TCCAGCCTGG
AAGGATTACC TTGTGAAACG GGTAGCCAAA TCCACCCCTG GCTCGGGCTG GGTGCCGCAA
GGTGCCTTTT GA
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| Protein sequence | MNEAMQIKEA RGDNSPRSLC SPGFKNWNSI EWKQVHRNVS RLQARIVKAE KEGRIGKVKA
LQIILTKSLA ARALAVKRVT ENRGKNTPGV DGSLWKTPGS KAKAVQHLRR KGYKASALKR
VYIPKANGKK RPLGIPTMRD RAMQALYQMA LDPVAECRAD VNSYGFRRHR STADAIEKCF
AVLSRKLAGR WVLEGDIKGC FDNINHQWLL DNIPTDKKML NAWLKAGVVH KGAFHATEAG
TPQGGIISPV LANMALDGLE DALQARFGSK ISPRRKACRI NLVRYADDFI ITGSSPELLE
NEVKPLVQNF LSERGLALSA EKTSITYITD GFDFLGQNIR KYRDKLLIKP SRKSISNLLE
KVREIIKSHK SSTAGGLILL LNPIIRGWAN YHRHVVSGRV FARVDHAIWQ AIWAWAVRRH
PKKSKKWVRS KYFTTEGGNN WAFFGETYAG VRVLLFKATS LGIIRHIKVR QDLNPYDPAW
KDYLVKRVAK STPGSGWVPQ GAF
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