| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2700 |
|---|
| Symbol | |
|---|
| ID | 4483055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 3415741 |
|---|
| End bp | 3416202 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639723447 |
|---|
| Product | transposase, IS3 |
|---|
| Protein accession | YP_866601 |
|---|
| Protein GI | 117925984 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.423605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCATGG ACTTCTTCAC CATACCGACA ATCTTTTTCA AGGTGCTGCA CGTCCTGATT
CTTATTGATC ATGAGTGGCG GCGTATCATT CACATCAACG TTACCACCAA TCCAACATCA
ACTTGGGTTG TCCAGCAAAT TCGGGAGGCG TCCCCTTGGG ATACAGCACC ACGATTCCTA
TTGCACGACC ACGATCCGCT TTTCATGGCC AGCCAATATG CGCTCAAAAG AATGGGCATT
GAAACTGTGA TCACGGCAAA GGCCTCGCCC TGGCAAAACG CCTACTGCGA AAGAGTGATC
GGCAGTTTAC GCCGAGAGTG CTTTGATCAC ATCATCGTGC TCAACGAAGA ACACCTGCAA
CAGCGGCTTG GGGAGTATGT GGATTATTAC CAACTAGCGG ACCCATTTAG GACTGTCCAA
AGATTCCCCA GTCCATCGGG CAGTCCAGCC AGAAGAGTCT AG
|
|---|
| Protein sequence | MAMDFFTIPT IFFKVLHVLI LIDHEWRRII HINVTTNPTS TWVVQQIREA SPWDTAPRFL
LHDHDPLFMA SQYALKRMGI ETVITAKASP WQNAYCERVI GSLRRECFDH IIVLNEEHLQ
QRLGEYVDYY QLADPFRTVQ RFPSPSGSPA RRV
|
|---|
| |