| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2698 |
|---|
| Symbol | |
|---|
| ID | 4483053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3414263 |
|---|
| End bp | 3415219 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639723445 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_866599 |
|---|
| Protein GI | 117925982 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5464] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.444632 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGA TTACCCAGCC GCACGATCGG TTTCTGAAGG CATTGTTGAG TGATCCAGAT
AAGACTGGAA CTTTGCTTCG GGAGCGTCTG CCAAAGGAAG TAGCAGAGTT ACTGTCATCA
GAGCCGCCTG TCTTGGTGGA TGGAACCTTC ATTGATGGCG AGTTTCGGGA GCATTTAACG
GACCGGCTTT TCAAGGTTAA GACTCAAGAG GGGAAGGCGG CATACATTTA CGCGCTGATT
GAGCACAAGA GCTATGCAGA CGAATGGGTT GCCTTTCAAC TTTTGCGCTA TATGGTCAGG
ATCTGGGAGC GGTTTCTGAA AGAAGGGCAG CAGAAGCTAC CTCCGATTGT GCCTCTGGTG
GTTTATCATG GGGCTCGTGA GTGGACGGTC CCAAACCAGT TTTCAGCATT GCTTGAAGCA
GATAAGGGTT TGTTACACCA TCTGCTTGAT TTCAGCTTTG CGGTGACGGA TTTAGGGCGC
ATCGCGGATG ATGACCTGTC TCAGGATACT CATTTGCGAG CTGCTCTGAT GGCGATGAAG
TATGCGTTTC ATAGTGCGGA TGGTGTGGTT GTCATTCCGC AGATAGGGAA GGGTGCCCAA
GGGGATCCCG AGTTTGCCAA GCTGGTGTTG AGATATCTGA TTCAAACGTA CAGGGGAATG
ACAATGGCAG ATGTACAGGC ATATGCGGAA GAGGCTTTTC CAGGAGAAGC GGAGCACTAT
GCATCGCAGT TTGCGCGTGA GATGATGTCT AAGGGTCGTC AAGAGGGCCG TCAAGAGGGC
CGTCAAGAGG GCCGTCAAGA AGGTGAATCT TCACTTCTTC TGAGACAGCT TCATCGCCGA
TTTGGAGAAG TACCTGGTTG GGCGGAGTTA AAAGTAGCGA ATGCTACAAT TGATGAACTG
GAGACCTGGG GTGAGCAAAT TTTTGATGCG GAGACGCTGG AAGCCGTATT CAAGTAG
|
|---|
| Protein sequence | MTKITQPHDR FLKALLSDPD KTGTLLRERL PKEVAELLSS EPPVLVDGTF IDGEFREHLT
DRLFKVKTQE GKAAYIYALI EHKSYADEWV AFQLLRYMVR IWERFLKEGQ QKLPPIVPLV
VYHGAREWTV PNQFSALLEA DKGLLHHLLD FSFAVTDLGR IADDDLSQDT HLRAALMAMK
YAFHSADGVV VIPQIGKGAQ GDPEFAKLVL RYLIQTYRGM TMADVQAYAE EAFPGEAEHY
ASQFAREMMS KGRQEGRQEG RQEGRQEGES SLLLRQLHRR FGEVPGWAEL KVANATIDEL
ETWGEQIFDA ETLEAVFK
|
|---|
| |