| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2696 |
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| Symbol | |
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| ID | 4482548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3410924 |
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| End bp | 3412702 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639723443 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_866597 |
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| Protein GI | 117925980 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.763446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCTC TGACGAAAGT ATTTGATATG CCGAAGAATG ATTCTATGGT TCGTCGATGT
ATGATCGCCG GTTTGGTCGC TTGCATCTGC CCCATTCCCG CATCCTTTGC TCAGTCCATA
CCCAGTGCAG GTCAACAATT GAACCAGATG GAACAGCAGC AGTTGCAGCA AAGCCTGCCT
CAAGATATTC CAGAGGTTAC GCCAGAAGAG TCCGCACCAG TACAGCGTGG AAATCAGACT
GTCAAAATTC AGGTTAACCG CTTTCAGTTT CAAGGCGCAT TAACCCTGGC TGATGAGCAA
GCTTTACAGG CGTTACTGGC CCATACAAAA GGCAAAAGGT TGAATTTTAA TGAGTTAGAA
GGGCTAACGC GGCTGATCAA TCACTATTTT AGTGATCGTG GTTACAAATT AAGCCATGCC
ACATTACCCC CTCAAGATAT CACGGATGGT GTCATCACCA TCCAGATTCA TGAGGTTCGT
TTAGATGATG TGGATGTGGA GGGGCATGAT CTTCGGATCC CAGAAGAGTT GATCAAACGC
CGTTTTACCA GTGCTAACCC CGTTGGCGGT TTGATTGCCG ATCAAAAGGT GGAGCGTGGG
GTGCTGTTGC TCCAGGATCT GCCGGGTATC AAGCCCTCCG TCAATATGGC TGCGGGCTCC
AAGCCGGATA CCACCAAAAT GGTGCTGGAT GTGGAGCAGG GAGATCTGCT TAAACCCAAG
CTGTTTGTGG ATAATGGCGG TAACCGACTC ACTGGCCGCG TGCGGATGAT GGGGTTGTTG
GATGTGAACA GCGCCTTGAA GCGCGGCGAT CAACTCTCCC TCAATATTAT GAAATCCATG
GGAGAGGGCT ATTTCAACTA TGCCTCCATG AACGCGAATC TCCCCGTTGG TGATTCTGGA
TGGAAGGTGA GTGTCGGTGG CAACCTGTTA AGCTATAGAG CAGGCGGCTC CTTTGAAACG
CTACGACAGA TCGGCCATGC CGCCCAGTTG ACTTTGGGGG CCTCCTACCC GCTGCTTTTA
AACCGTAGCC AAACCCTCAA TCTCACCACC GGCTTTGTGT ATAAAAAGCT GGATGATGAG
TCCCTGGGTA GTGCCACCAA CGATAAAAAA CTGGCCATTT TTAAAGCAGG TATGAATGGT
AGTGTGACCG ACACGTTTTG GCGTGGTGGG TTCACTTCAG GCTCCATGAG CTATGAGGTA
GGGGATCTGG ATCTGAGTGG TTTGACCTCG GCCTATGATG CCGATCAATC CTCCACAGGC
CCTCATGCCC ATGGCGGCTA TGGCAAGCTT TCTGTGCGCG TGCGACGCAT CCAGCGGGCT
GGTAAAAATC TGACTTTTCT AGCCGATCTC TCCGGCCAAT ATGCCTCAAA AAACCTGTCC
ACCTCAGAAA AGTTTCAACT GGGTGGTCCC TCTGGTATCC GTGCCTATCC CGTTGGGGAG
GCCTCCGGTG ACCATGGAAT GATGGTGAAC CTGAATGCGC GCTATCTGGC TGCTGAGGAT
ACCCCGCTTG GACGTGTGCA GCTGACCGCG TTCTATGACT GGGGGAATGT CCATCAATAT
GCCGACCCTG ACAATCTCGT CCTCTCTACA CCCAACAGCT ACAGCCTCTC CGGATATGGT
CTGGGTGTTC TGGTGGGAAC CGCTGGCAAG TCGGAGTTCA ACCTACAGCT GACCCGAACC
CTTGGTGACC ATCCAGGGCG GGACAGCAGC ACCAATCTGG ATGGTGATGG AACCCAGTAT
GACACGCGTA TGTGGCTCTC CTACTCCCAT GCTTTTTAA
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| Protein sequence | MSSLTKVFDM PKNDSMVRRC MIAGLVACIC PIPASFAQSI PSAGQQLNQM EQQQLQQSLP
QDIPEVTPEE SAPVQRGNQT VKIQVNRFQF QGALTLADEQ ALQALLAHTK GKRLNFNELE
GLTRLINHYF SDRGYKLSHA TLPPQDITDG VITIQIHEVR LDDVDVEGHD LRIPEELIKR
RFTSANPVGG LIADQKVERG VLLLQDLPGI KPSVNMAAGS KPDTTKMVLD VEQGDLLKPK
LFVDNGGNRL TGRVRMMGLL DVNSALKRGD QLSLNIMKSM GEGYFNYASM NANLPVGDSG
WKVSVGGNLL SYRAGGSFET LRQIGHAAQL TLGASYPLLL NRSQTLNLTT GFVYKKLDDE
SLGSATNDKK LAIFKAGMNG SVTDTFWRGG FTSGSMSYEV GDLDLSGLTS AYDADQSSTG
PHAHGGYGKL SVRVRRIQRA GKNLTFLADL SGQYASKNLS TSEKFQLGGP SGIRAYPVGE
ASGDHGMMVN LNARYLAAED TPLGRVQLTA FYDWGNVHQY ADPDNLVLST PNSYSLSGYG
LGVLVGTAGK SEFNLQLTRT LGDHPGRDSS TNLDGDGTQY DTRMWLSYSH AF
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