Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2690 |
Symbol | |
ID | 4482542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3394100 |
End bp | 3394765 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639723438 |
Product | cytochrome B561 |
Protein accession | YP_866592 |
Protein GI | 117925975 |
COG category | [C] Energy production and conversion |
COG ID | [COG3658] Cytochrome b |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.117812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0669549 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAAC CATACATAAA GGTGTGGGAT CTGCCCACGC GACTGTTCCA TTGGAGCTTG GTGGCGGTTG TCGCAGGCTC GTTCTACACG GTAAAAACCT CACAAATGGC ACTGCATGCT TACTTGGGCT ATGGGGTGCT TACCCTGGTG CTCTGGCGGC TAGGATGGGG CCTTTGGGGG TCAAGCACCA GTCGCTTTAG CCAATTTGTG CGCGGTCCCC GGGTGGTGCT GGCTTATCTG CGTAGCTTGC TTGCGGGGCA ACCCCATGGG CATTACGGGC ATAATCCGGC GGGTGCGATG ATGATTGTCG CCTTGTTGCT GGTCTTGTTG TTACAAGGGC TGGGGGGACT GTTTGCCAGC GAGAATACCT TCCTGTTTTT TGATGGTCCA TTGGTGCATT GGGTGGGGGC AGCTTGGAGT GAAACCCTAA CCTTTTGGCA TAAAAGCAGC GGTTCTCTCC TTATGGTGTT GGTGGGGCTG CATGTGCTGG CAAATCTGCT CTATCTTCTG CTGTTTCGGC AAAATTTGGT GCGTCCCATG CTCACCGGGT TACGTCCCCC AATGCCTTCT GGCGAAACCG GGGCGACCCC ACAGGCCCCG CTGGGGCGGG CGCTGGTAAC ATTGTTGATT GCTGGGGCAT TGGTCGTGGG GTTATTGCAA TTTTAA
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Protein sequence | MSQPYIKVWD LPTRLFHWSL VAVVAGSFYT VKTSQMALHA YLGYGVLTLV LWRLGWGLWG SSTSRFSQFV RGPRVVLAYL RSLLAGQPHG HYGHNPAGAM MIVALLLVLL LQGLGGLFAS ENTFLFFDGP LVHWVGAAWS ETLTFWHKSS GSLLMVLVGL HVLANLLYLL LFRQNLVRPM LTGLRPPMPS GETGATPQAP LGRALVTLLI AGALVVGLLQ F
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