Gene Mmc1_2690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2690 
Symbol 
ID4482542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3394100 
End bp3394765 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content56% 
IMG OID639723438 
Productcytochrome B561 
Protein accessionYP_866592 
Protein GI117925975 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.117812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0669549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAC CATACATAAA GGTGTGGGAT CTGCCCACGC GACTGTTCCA TTGGAGCTTG 
GTGGCGGTTG TCGCAGGCTC GTTCTACACG GTAAAAACCT CACAAATGGC ACTGCATGCT
TACTTGGGCT ATGGGGTGCT TACCCTGGTG CTCTGGCGGC TAGGATGGGG CCTTTGGGGG
TCAAGCACCA GTCGCTTTAG CCAATTTGTG CGCGGTCCCC GGGTGGTGCT GGCTTATCTG
CGTAGCTTGC TTGCGGGGCA ACCCCATGGG CATTACGGGC ATAATCCGGC GGGTGCGATG
ATGATTGTCG CCTTGTTGCT GGTCTTGTTG TTACAAGGGC TGGGGGGACT GTTTGCCAGC
GAGAATACCT TCCTGTTTTT TGATGGTCCA TTGGTGCATT GGGTGGGGGC AGCTTGGAGT
GAAACCCTAA CCTTTTGGCA TAAAAGCAGC GGTTCTCTCC TTATGGTGTT GGTGGGGCTG
CATGTGCTGG CAAATCTGCT CTATCTTCTG CTGTTTCGGC AAAATTTGGT GCGTCCCATG
CTCACCGGGT TACGTCCCCC AATGCCTTCT GGCGAAACCG GGGCGACCCC ACAGGCCCCG
CTGGGGCGGG CGCTGGTAAC ATTGTTGATT GCTGGGGCAT TGGTCGTGGG GTTATTGCAA
TTTTAA
 
Protein sequence
MSQPYIKVWD LPTRLFHWSL VAVVAGSFYT VKTSQMALHA YLGYGVLTLV LWRLGWGLWG 
SSTSRFSQFV RGPRVVLAYL RSLLAGQPHG HYGHNPAGAM MIVALLLVLL LQGLGGLFAS
ENTFLFFDGP LVHWVGAAWS ETLTFWHKSS GSLLMVLVGL HVLANLLYLL LFRQNLVRPM
LTGLRPPMPS GETGATPQAP LGRALVTLLI AGALVVGLLQ F