Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2689 |
Symbol | |
ID | 4482541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3393014 |
End bp | 3394114 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639723437 |
Product | hypothetical protein |
Protein accession | YP_866591 |
Protein GI | 117925974 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.045764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.072114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGGAC AGGTCTTACA CCACGGCGCC CCAAATGCTC CACTCAGACG ACCCTTGGCC TACCCTGCGG ATCTCCTAAC CCCGCTGGCG GACACACCAC TTATACCCAG GAGCCAATCA ACCACTATGC TCGTGCAGAA ATCCCCATCC ACCGCTTATT TTTGGCTGCT CTCCAGTGGC TGGCTAGGCG GGCACCATTT TTACCTGCGC GATCCGATTT TAGGCGGGCT CTCCGTCATG CTCTGCTGGA CTGGCCTGCC CCTGCTGGCG GCCATACTCG AACTACCCAC CCTGCACCGC CGCGTCCGCC GTCTTAATCG TCTGCTGCGG GCCGACTATC ATGGCCGTGT GGATGGCTGG GATCTACCCG CCCCCAGTTG CGCACGTTGC CACCGTAACA TCGCCTGGGT CATCTTGCAC AGCCAGGGTG GCAGCATTAG CCGTAACCAC CAGCTCCTGC GTCTAACCGC CCCTTGGTGG CGCCACAGCG GTTTGTTGCA CCCCGCTTAC CGCGATCCCC ATGCGGGGGA CCATCTCTGC CCTTCGTGTA CGGGGGAGAT CACGCCAGTG GTTTCCCAGA ACGTCCCGCC AGGGCGAAAC AACGCCCTCA CCCCTCCCTC GCCCCTGTTG ATTGGTGCCC TTCTCTTGGC GGCCCTGTGG ATGCTGGTGC ATGGCATGGG GGGTGCCCTT CAACACACCT ATGCGTTGTA TAGCCATTGG CAGACCACAC CTGGCGTGGT GACCTATAAT GCGGTGGATA TGCTCACCCA CCATACCCCC AGTTGGTTGG GTCAAAACGT GACCTACCAA CCCCAGGTGC AGTTTCGCTA TGTCTGGGAA AATCAGCGCT GGAGTATGGG CGGGCTGTTG GCCCAAGCGC CCCCCAATTT TAGCAGCCGA GCTCGGGCCG AACACTATTT GCGGCGTTAC TACCCCATTG GTCAGGTGAT CGAAGCACGG GTCAACCCCG ACGACCCCGA GCAAGCTTAT GCCTTGGTTC GACCCCTCTA CCATCCTCTC TGGGTCATAG CAGGCATAAG TAGCCTGTTT CTCGCACTCC ACCTGGGTCG TCGTCGTCGT CGCCTTTTAA AATTGCAATA A
|
Protein sequence | MAGQVLHHGA PNAPLRRPLA YPADLLTPLA DTPLIPRSQS TTMLVQKSPS TAYFWLLSSG WLGGHHFYLR DPILGGLSVM LCWTGLPLLA AILELPTLHR RVRRLNRLLR ADYHGRVDGW DLPAPSCARC HRNIAWVILH SQGGSISRNH QLLRLTAPWW RHSGLLHPAY RDPHAGDHLC PSCTGEITPV VSQNVPPGRN NALTPPSPLL IGALLLAALW MLVHGMGGAL QHTYALYSHW QTTPGVVTYN AVDMLTHHTP SWLGQNVTYQ PQVQFRYVWE NQRWSMGGLL AQAPPNFSSR ARAEHYLRRY YPIGQVIEAR VNPDDPEQAY ALVRPLYHPL WVIAGISSLF LALHLGRRRR RLLKLQ
|
| |