Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2681 |
Symbol | |
ID | 4482533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3384270 |
End bp | 3384929 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639723429 |
Product | hypothetical protein |
Protein accession | YP_866583 |
Protein GI | 117925966 |
COG category | [S] Function unknown |
COG ID | [COG2928] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0401595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.577134 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTGAAGC GATTTCGAGT TCGACTAAGA CAAAATTTTC TTGCGGGTCT GCTGCTGGTT CTGCCCGTTG GGGTGACGCT GTTTATTCTA CATCTCATGG TTGCCAGTAG CGATCTGCTG CTCAGTTGGT TGCCGGAACG GTTGCAACCC GATCAACTGC TGGGCTTTCA CCTGCCTGGG CTGGATCTGT TGCTCACGCT GCTCATGATT TTACTGGTGG GGAGCGCAGC GCGTCACTGG GTGGGACGCT GGTTGGTGCA GTGGAGTGAG CGCTTATTCG GGGCTATCCC CTTGGTGCGC AATCTGCACC ACGCCGTCAA ACAGTTTGTG GGTACGCTAT TGGGACGCCG CGCCAAAAGC TTTAAACAGG TGGTATTGTT GGAGTACCCT CGCCCAGGGC TGTTTGCCAT TGGCTTGGTC ACGGCCCAGG GACGGGAGGA GATTCTTGAA GTGATGGGGG AGCCGCTCTA CCACGTGTTT GTGCCAACCA CGCCCAACCC GACCAGCGGC ATGCTCCTGT TTGTGCCAAA AAAAGAGGTA ATTGAGCTGA ATATGAGTGT GGAGGAAGGG CTTAAATTGG TTATTTCCGG TGGTCTGGTT ATCCCGAGCA GAAATGCGGC CAGTACCGTT CCCACCCGTC AGGGCGACCG CTCATGTTGA
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Protein sequence | MLKRFRVRLR QNFLAGLLLV LPVGVTLFIL HLMVASSDLL LSWLPERLQP DQLLGFHLPG LDLLLTLLMI LLVGSAARHW VGRWLVQWSE RLFGAIPLVR NLHHAVKQFV GTLLGRRAKS FKQVVLLEYP RPGLFAIGLV TAQGREEILE VMGEPLYHVF VPTTPNPTSG MLLFVPKKEV IELNMSVEEG LKLVISGGLV IPSRNAASTV PTRQGDRSC
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