| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2648 |
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| Symbol | |
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| ID | 4482921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3347310 |
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| End bp | 3350303 |
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| Gene Length | 2994 bp |
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| Protein Length | 997 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639723392 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_866550 |
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| Protein GI | 117925933 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTGGC GGACTACGCA CAAAGCCGCT CTCGCGGTGG GGCTACTAGC TAGTGCATTC
ATCATTGCCA TCACGTGGCA ATCCCAACAC CTGCTGGAAA ATGATGCCAT CCACAACCGC
AACTTGGCCC TAGAGGATAC AGCTGAACAT TTCAGTTGGA CGCTGCAGAG TCGAATTTTT
GAGATTCGTG ATCAACTCAG GGCACTAGCA TCCAACTCTC TTGTTGCTAA TGCATTGGCC
GATGATAAGG GGCGAGAAAT CTATCTCCCC ACCTTTTTCT CTGGCATTCA GACAATAGGC
GGCGTCCCGG CGCGTCTGAG CCTCACCAAT TTTTTGGGCC GAGAGGTGGT GAGCAGCCAA
CCACAACTCC CTCTTTTACT TGAGACAGAG CTAATAGGAG CAGCCATCCA AACTACTCAG
CCACTGACAC ATGTGCATCC TGTGGACGGC GGTAGCTTGT ACATGATAAT GATGGAGCCC
GTTATTTACG CCAACACAGG CATGGCAGAA GGTGCGTTGA TCCTACAAAT ACGCATAAGT
GACCTGCTGG ATCACAAACA AATCCATTCT TTCTGGGAGC ATTCCCGGCA GATTACTGGC
CTGGGCATGA CCTTCCATGC TTTAGGCCAC AATAAACCCA TAACCCTGAC AGTTGGCAAA
AGTAGACGCA CAAGCATCAG CCGAATTCTG CGCCTGGACG AACAGCATCA GGGAAATATA
CGGTTCACAG CCGATGTGGT TTTGTTCACC ACCGATGACT ACTTTCAAAC TGCAATGGCC
AATAAACGCC AAGATTTCTT AATGCTGGGC TTAGCCTGGA TTGGAATAGC AATCTTAAGC
GCTTGGTTGT TGGTTACGTG GCTAAACCGT CGGTTAAATG AAGTGGCGCG TGAACTGAGA
GGATTAAATC TCTCTGGAGC CTCATTTGGC CGTCTCAAAG TTCAAGGCGA GGATGAAGTG
CGCCAAGTGG CAGAGGCGTT CAATGCCGTG CTAGAACGTT TGGAGAGTGC CTATGGGGAG
TTAGCTAAGA AAAGCGCTCG CCAAATGCAG CTAGAACGCG AGAAGTACCG TGGGGTGGTT
GACCAAGCGG GAGAAAGCCT CTTGATCTTC GATCTTGACG GACGAGTGGT TGAGGCGAAC
TCTGCCGCTG AGAAGCTACT TGGCTATCGT CGGGTGACGC TGCTGAATTA CACGCAAGAC
CAACTATTGG CCCCAAACTC CACTCTGACT ATACCCAATC ACGATGGCGA TAACGCAGAG
AACCCATCCC ACGTCACTTT CGAGACCCGT TTACACACAG CAGATGGCCA AGATCTGGAG
GTGGAGGTGT GGGCAGGGTT CCTTGAGATT GACTACGTGC AACACACACT CTGGCTAGCC
CGAGATATTA CTGACCGTAA ACGCCTGGAG GCAGAGATGG TAGCTGCCCG AGATATGGCG
GAAAAGGCCT ATCAAGCCAA GAGCATCTTT CTTGCCACCA TGAGCCATGA GATCCGTACC
CCCATGAATG CTATTCTGGG TACAGCGGAA TTGCTGGCAG AGACTGAACT TGATGCAGAC
CAGTCCCGCT ATGTACGCAT GTTTACCTCC GCAGGCGAGA ACTTACTCCA GGTGATCAAT
GACATCCTGG ATATTTCCAA GTTTGAGGCT GGCCATATAG AGCTGGAACA GCGTGTCTTT
TCAGTTCGAG AAATGATGGG GGATCTTCAT AAGTTGCTGG CCTATAAATG TAAGGAGAAA
GGCCTTTATT TGCTGGTTAA CGCCAGCGAA ACGACCCCAG ATAGTCTGAT CGGAGACCCA
ACCCGCTTAC GCCAAGTGTT GATTAACCTT TTGGGTAACG CGATCAAATT CACTGATACT
GGGACAGTCG CTTTGTTGGC TCATTCTGAA CAGATCGCAG ACAAGCAGGT GCAATTAGCT
TTCCATGTGG TAGATACAGG GATAGGCATT TCAGATGCTG ATCAAGAAAA GGTTTTTCGC
CCGTTTGAGC AGGCTGGAAC CTACATCACA CGGACCCATG GTGGTACTGG TCTGGGATTG
TCCATTTGCC AAAGCTTAAT TCATAAGATG GGCGGTAAGA TCACTGTGCA TAGCCGTGCG
GATCACGGTA GTACCTTTAC AGCGCAAGTA AATCTAGATC TGGCAGAGGA ATCCACGGCC
CAAAACTTCT CGCGTCTCCT TACCGGACAA AGTGCCTTGG TAATCCACGA TCATGTAATC
CACCATCACT TTTTTGAGGA GGGTTTAGTC AGTATCGGAG CCAGTATTAA GAGCTTTGGG
AATCTTGAGC AGTTGGAAAT GTCCGTGCGT AGGTCACGAG AGGATGGCGG TGTGGATTTT
CTGCTCATTC ACCACGAAAA AGACCGGCTT GCTCCGTCCA CAGAGGCCAA CTTGGTCACG
ATCCGTGGCC TGCCAGGCAT GGCGCAGCTG CCAATTCTCT TGTGTGGTAA CCTGCAGACA
GTGGAGACCA TCCAACGCCT AGAGGCTCTG AGAGTAGTAT TCATCTCGGA TCATTACGAC
AAGCATTTAT TTTTTGAAGG TGTCAGACGG GCTTTGGAGA TTGTGAAAGA TCAACCGATG
CTTGAGAATG CCTCAGCCGA CTCAACCTGT CTTTCTATCC TGTTAGCTGA AGATAGTCAT
GATAATATAG AACTATTCCA AGCATTTCTT AAGCACACCC CCTATCGGGT AACCGTAGTC
AATGATGGCG CCCAGGCCGT AGGAAAGGTG ACGGTTAAGA AGGATAGTTT CAATCTCGTA
TTCATGGACA TTCAGATGCC TATTATGGAT GGTCTGACTG CGACCCGAGC CATCCGCGAC
TGGGAGAAAG AAAACCACTG CTTTCCTATA ACGATCGTTG CTCTCACTGC TCACGCTATG
GAGGAGCACC AGCAAGAGAC AATCCAGGCG GGCTGTAACA GCTATCTAAC CAAGCCGATC
AAAAAACGGG ATTTACTTGG GTACTTGGAT AGATTTTCCA GGAGTGGGGA GTGA
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| Protein sequence | MLWRTTHKAA LAVGLLASAF IIAITWQSQH LLENDAIHNR NLALEDTAEH FSWTLQSRIF
EIRDQLRALA SNSLVANALA DDKGREIYLP TFFSGIQTIG GVPARLSLTN FLGREVVSSQ
PQLPLLLETE LIGAAIQTTQ PLTHVHPVDG GSLYMIMMEP VIYANTGMAE GALILQIRIS
DLLDHKQIHS FWEHSRQITG LGMTFHALGH NKPITLTVGK SRRTSISRIL RLDEQHQGNI
RFTADVVLFT TDDYFQTAMA NKRQDFLMLG LAWIGIAILS AWLLVTWLNR RLNEVARELR
GLNLSGASFG RLKVQGEDEV RQVAEAFNAV LERLESAYGE LAKKSARQMQ LEREKYRGVV
DQAGESLLIF DLDGRVVEAN SAAEKLLGYR RVTLLNYTQD QLLAPNSTLT IPNHDGDNAE
NPSHVTFETR LHTADGQDLE VEVWAGFLEI DYVQHTLWLA RDITDRKRLE AEMVAARDMA
EKAYQAKSIF LATMSHEIRT PMNAILGTAE LLAETELDAD QSRYVRMFTS AGENLLQVIN
DILDISKFEA GHIELEQRVF SVREMMGDLH KLLAYKCKEK GLYLLVNASE TTPDSLIGDP
TRLRQVLINL LGNAIKFTDT GTVALLAHSE QIADKQVQLA FHVVDTGIGI SDADQEKVFR
PFEQAGTYIT RTHGGTGLGL SICQSLIHKM GGKITVHSRA DHGSTFTAQV NLDLAEESTA
QNFSRLLTGQ SALVIHDHVI HHHFFEEGLV SIGASIKSFG NLEQLEMSVR RSREDGGVDF
LLIHHEKDRL APSTEANLVT IRGLPGMAQL PILLCGNLQT VETIQRLEAL RVVFISDHYD
KHLFFEGVRR ALEIVKDQPM LENASADSTC LSILLAEDSH DNIELFQAFL KHTPYRVTVV
NDGAQAVGKV TVKKDSFNLV FMDIQMPIMD GLTATRAIRD WEKENHCFPI TIVALTAHAM
EEHQQETIQA GCNSYLTKPI KKRDLLGYLD RFSRSGE
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