| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2636 |
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| Symbol | |
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| ID | 4480782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3332656 |
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| End bp | 3333318 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639723380 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_866538 |
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| Protein GI | 117925921 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.128146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTTGGC TACAAATCGA CTGGATGCTA GCTCCTAGTG AAGAAGCGCA TCAGTTTTTA
ATTTTTAATT CAATAATGCG CACCATAATT TCATTAGTTG GTGCCTGGCT TATCTATTCT
TTGCGCAAAG CTTTGCAACA GCTAGAGGTT ATGGCAACAC ACGACAAACT AACAGGTATA
TTGAATCGTC ATGGATTCCA AGAGAGGGGG AAATATATTA TTGACCAATC TCAACGTCAC
AGCTGGCCTT TAGCAGTTGT GATGATGGAT ATCGACCATT TCAAAAAAAT TAATGACAGT
TTTGGCCATG ATATAGGAGA TCTGGTTCTC CAATCTTTAG GCTCAGAATT AAAAAAATCT
GTTAGATCAA CAGACATAGT AGCACGACTT GGGGGTGAAG AATTTGCTCT GATTCTTCCA
AATACAGATA GCAAGCATGC CCATCAAATA GCGGATAGCA TTCGCAAAAA AATAGAAACC
TCTCGACTTT CATTACCTGA TGGAAAGTTT TTGACTTATA CGCTGAGTCT TGGTGTAACC
TCAGGATTAG GAATTGATAA AATGGATTTA TTGCTCAATC AAGCAGATAA TGCTCTGTAT
AGGGCAAAGG GCACTGGGCG AAACCGTGTG GTAAGCTTTC ATCAAACTGC TCATTCCTGT
TAG
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| Protein sequence | MFWLQIDWML APSEEAHQFL IFNSIMRTII SLVGAWLIYS LRKALQQLEV MATHDKLTGI
LNRHGFQERG KYIIDQSQRH SWPLAVVMMD IDHFKKINDS FGHDIGDLVL QSLGSELKKS
VRSTDIVARL GGEEFALILP NTDSKHAHQI ADSIRKKIET SRLSLPDGKF LTYTLSLGVT
SGLGIDKMDL LLNQADNALY RAKGTGRNRV VSFHQTAHSC
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