Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2631 |
Symbol | |
ID | 4480777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3328080 |
End bp | 3329543 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639723375 |
Product | transposase, IS4 family protein |
Protein accession | YP_866533 |
Protein GI | 117925916 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5421] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.018654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCTT ACAAATCTTT GGGTCTTAAG CGTTTGCTGG GAACAAAACA TACGCGTTAC CGCGATTTGG TCTTGGCACT TATTGCCCAG AGAGTGCTTC AACCTGCATC CAAACTGGCC TCGCACCGGC TGTTCAACAC GACCACCTTG GGGCAGGAGT TTGGCGTGGA CGATGCCAAC AAGGAAGAGC TCTACAAGGC CTTGGATTGG CTCGGAGCGC AACAGGAGCG AATTGAGAAT CTCCTGGTGA AACAGCACCT TCAGGATGGC TCCATGGTGT TGTTTGATCT CACCTCCACC TATCTTGAAG GAAGGCAGTG CGAACTGGCT GAATACGGCT ACAGCCGAGA CCACCGACCA GACAAACTAC AGATTGAGAT TGGCCTGCTG TGCGATAAGG AGGGCCGCCC TCTAGCCGTG GAGGTGTTTC CCGGCCATAC AGGCGATCCC ACGACGCTGA CCGCCCAAGT GAACAAGCTC AAGGCGCGCT TTGGCCTCAA GCGGGTCATT GTTGTTGGTG ATCGGGGCAT GATCACCCAG GCCCGGATTG ACGAAGATAT CCAACCTGCT GGCTTTTCAT GGATTACCGC CTTGCGCCAC AGTACCATCC GATCACTGGC CAAAGCAGAC AACTGGCCTT CCTTATTCGA TGCGCGCAAC TTTGCCGAGA TTACCTCCCC AGATTTCCCA GGTGAGCGAC TGATGGTTTG CCGCAATCCC TTCCTAGCCG AGGATCAGGG ACGCTCACGA CGGGAACTGT TGGCTGCCGC AGAACAGGGG TTGGAGACGA TCCTGCAAGC CGTGCAAGAG GGCTCTTTGC GTGATTGTGG CCAAATTGGC AAACGAGCCG ACCGGGTTCT GCGCAAGCTT AAAATCGCCC GTTATTTCAA CTTGGAGATT GCTCCAGGGC GGTTCATTTG GTCCCGTAAG CAGGCTGTTA TTGATCAGGA AACAGCCCTG GACGGTATCT ATGTGGTCCG CACCAACCTT CCCGAAAAGG AGATCTCCAG TGCCGACACG ATCCGCCAAT ACAAATCATT GGCCCAGGTA GAGAGCGCCT TCAGAGATCT AAAGAGCAGT CTGGATATAC GCCCGATCTT TCATTTCCGT GCCGATCGCA TCAAAGCCCA TGTCTTCCTG TGCATGCTGG CCTACATGGT AGAACGGGAA ATGCGGATCA AGCTCAAAAC GCTACTGTTC ACCGATGAAG CGCCACTGCT CCCCGACGAT CCTGTCATGC CCAGAGAGCC ATCTCCAAAC GCCAAAGAGA AGACCGGCAC AAGACGTTCT CCAACAGGCC ATGCCTTGCA GAGCTTCAGC ACCCTGTTGG AGCAATTAGC CACCTTGACC CGTAACACCG TCCGTGCCCA ATGGGAGCCC GCGGCTGGTA AACCTTTTGA AATGCTTGCT AACATCACCC CTCTACAGCA GGAGGCTTTC CGGCTACTCA GCATCTCGCC TTAA
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Protein sequence | MGAYKSLGLK RLLGTKHTRY RDLVLALIAQ RVLQPASKLA SHRLFNTTTL GQEFGVDDAN KEELYKALDW LGAQQERIEN LLVKQHLQDG SMVLFDLTST YLEGRQCELA EYGYSRDHRP DKLQIEIGLL CDKEGRPLAV EVFPGHTGDP TTLTAQVNKL KARFGLKRVI VVGDRGMITQ ARIDEDIQPA GFSWITALRH STIRSLAKAD NWPSLFDARN FAEITSPDFP GERLMVCRNP FLAEDQGRSR RELLAAAEQG LETILQAVQE GSLRDCGQIG KRADRVLRKL KIARYFNLEI APGRFIWSRK QAVIDQETAL DGIYVVRTNL PEKEISSADT IRQYKSLAQV ESAFRDLKSS LDIRPIFHFR ADRIKAHVFL CMLAYMVERE MRIKLKTLLF TDEAPLLPDD PVMPREPSPN AKEKTGTRRS PTGHALQSFS TLLEQLATLT RNTVRAQWEP AAGKPFEMLA NITPLQQEAF RLLSISP
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