| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2627 |
|---|
| Symbol | |
|---|
| ID | 4480773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 3324318 |
|---|
| End bp | 3325385 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639723371 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_866529 |
|---|
| Protein GI | 117925912 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0118934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCAC TATCACTCCT TATCTGGGGG CTGATCTCCC AGTTTTTCAG CCCTCGTCAT
AACGCGCAGA TCCGGCTGCT CAAAGCCCAG GTCAGAATAC TCCAGGAACG ACTTCCCAGC
CAGCGTGTTA TCGCCTCACC TGAGGAAAAA TCTGAACTGT TGCGACTGGG GGCTGACTTT
GATCACCAGA TCAACGATCT GATCATGATC GTCAAGCCCA ACACCTATCG TCGCTGGCTC
AACCAATCCT CATCAGGAAA GCCTTTCAAG CAAGTCGGCA GGCCACGACT GACTCAGGAG
TTGAGGGACA CAGTGATCTG CATGGCCAAG GAGAATCTCC AATGGGGCTA TCGACGGATC
GTCGGAGAGC TCAAAAAGCT TGGCCTCTAT GCTGGAGCCA ACTCGGTCAA ACGCATTCTT
AATGAGGCAG GCATTCACCC AGAACCAGAG AAGAGCAAAC CGACACCACC TCTACCCTGG
GACACCTTCA TCAAGGCCCA CCTTGAAACT ACTCTGGCAT GCGACTTTTT CTCCAAAGAT
GTGTATACGC TGCTCGGCAA GAAAACCGCA TACGTGCTTA TTTTCATCCA CCTGGCTTCT
CGGCGTGCTT TTACCAGTTC AGCCACCTAT GCACCAGATA GCGCATGGGT CACACAGCAA
GCCCGCAATG CCCTTTTTTG GTGTGACCAG CAAGGCATCA AACCAAGCTA TCTGATCCGC
GACGGCGACA CCAAGTTCTC CGGCCCTTTT CTGGAAGTCT GGCGAAGCGA TTCCGTTCGA
GTGATCCAAA TACCGCATAA TGCACCACAG GCCAATGCCT TTGCAGAGTC CTTCATCGGC
ACGTTAAAAC GCGAGTGCCT GAACTATTTT GTCTGCTTCA GCCGGTCACA GTTAAACCAT
ATTCTCTCTA CCTGGCTCGA CCATTATAAC CATGATCGCC CACACCGTGG TGCTGGCCGC
GACAACAACG TGCTGGACGT TAATTTCAAA GCTGCCCGCG ATGGTCCCAT CAAATGCAAA
GAAAAGCTTG GAGGAATCAT CAAATCTTAC TATCGGGAGG CTGCATAG
|
|---|
| Protein sequence | MNSLSLLIWG LISQFFSPRH NAQIRLLKAQ VRILQERLPS QRVIASPEEK SELLRLGADF
DHQINDLIMI VKPNTYRRWL NQSSSGKPFK QVGRPRLTQE LRDTVICMAK ENLQWGYRRI
VGELKKLGLY AGANSVKRIL NEAGIHPEPE KSKPTPPLPW DTFIKAHLET TLACDFFSKD
VYTLLGKKTA YVLIFIHLAS RRAFTSSATY APDSAWVTQQ ARNALFWCDQ QGIKPSYLIR
DGDTKFSGPF LEVWRSDSVR VIQIPHNAPQ ANAFAESFIG TLKRECLNYF VCFSRSQLNH
ILSTWLDHYN HDRPHRGAGR DNNVLDVNFK AARDGPIKCK EKLGGIIKSY YREAA
|
|---|
| |