Gene Mmc1_2614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2614 
Symbol 
ID4480399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3312979 
End bp3313362 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content50% 
IMG OID639723358 
ProductXRE family transcriptional regulator 
Protein accessionYP_866516 
Protein GI117925899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.105443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGGAA ACCCACAGTT CGGAATGTTC ATTAGAAGCA TGCGTGAGGA GAAGAAAAAG 
CGAGACCCCG CTTACTCCTT ACGCAAGTTT GCAGAAGCCG CTGGAATCAG CGCCACCTTT
ATGAGCAAGG TGGAGAATGG TGAATTTGAT CCGCCTGCAC CGGATAAAAT CAAAAAGATG
GCGGAGCTTC TGGAGGTTAA TTCTGATGAG CTCCTGGCAA TGGCCGGGAA GGTAGATCCT
GACCTGTCGG GTATTATTCG TGATCAGCCC AGAGCGATGG CAGACTTTTT AAGGACTGCA
CGAGATCTGA ATCTTGGCCG AAAAGAGATA GAGGCGTTAA CAGATAAGCT TCGTGCAGAG
CGAGGCCTGG ATCCAAGCGA GTAG
 
Protein sequence
MPGNPQFGMF IRSMREEKKK RDPAYSLRKF AEAAGISATF MSKVENGEFD PPAPDKIKKM 
AELLEVNSDE LLAMAGKVDP DLSGIIRDQP RAMADFLRTA RDLNLGRKEI EALTDKLRAE
RGLDPSE