Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2607 |
Symbol | |
ID | 4482232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3306653 |
End bp | 3307291 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639723351 |
Product | hypothetical protein |
Protein accession | YP_866509 |
Protein GI | 117925892 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.648513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATAACA ACTGGAACGA TTTCAACAAC GCTGAGAGTC AGCAAAGTTT TGACCTGATT CCCAAAGGGA CCATTGCGCC GGTGCGCATG ACCATCAAGC CAGGCGGTTA TGATGACCCC AACCGGGGTT GGACAGGTGG GTATGCTACG CGTAATGCCG ACACTGGGGC TGTTTTCCTC AAGGTAGAAT ATGTCATCAC TGAGGGCAAA TACGCCAAAC GGAAGGTGTG GAGCAACATC GGCTTATTCA GCCAGAAGGG TCCGGAATGG GGCAATATGG GACGCTCTTT CATCCGCGCC ATCCTCAACT CTTCTCGCGG TCTGAAAGAT AAGGATAACT CACCCCAGGC TCAACAGGCG CGGCGCATCA ACGGCTTTGC CGATCTGGAT GGCATTGAGT TTTTAGCAAA GATCGATGTT GAGAAGGATC AGCGGGACGA TTCTGATAAA AACGTCATCA AGTTCGCCAT TACCCCGGAT CACAAGGAGT ACCAGGGCTA CAGTGGTGGT GGGACTCCTG CGCCTGCGGC ACCACCTGCT GGACAGGGAT GGCAGCAACC CCCTGCGCAA CAGCAGCCTG CGCCTCAGCA TCAGTCCCAG GCCGCACCCC CTCCTCAAAC GCCCAGTTGG GCACAGTGA
|
Protein sequence | MDNNWNDFNN AESQQSFDLI PKGTIAPVRM TIKPGGYDDP NRGWTGGYAT RNADTGAVFL KVEYVITEGK YAKRKVWSNI GLFSQKGPEW GNMGRSFIRA ILNSSRGLKD KDNSPQAQQA RRINGFADLD GIEFLAKIDV EKDQRDDSDK NVIKFAITPD HKEYQGYSGG GTPAPAAPPA GQGWQQPPAQ QQPAPQHQSQ AAPPPQTPSW AQ
|
| |