Gene Mmc1_2606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2606 
Symbol 
ID4482231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3304953 
End bp3306635 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content56% 
IMG OID639723350 
Producttype III restriction enzyme, res subunit 
Protein accessionYP_866508 
Protein GI117925891 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGAC CACGCCAAAA AATCTTTGTA GAGCGATCAG TGACCGCTCT CAAGGAACAT 
GGCAATACAC TCGGGGTCTG TCCCACAGGT GGGGGGAAGA CCTATATGTT GTCCTCTGTC
GTTGGGAAGG TGCTGAAAAA GAAGGAGGAA AAAGCCTGCA TTCTGGCGCA CCGGGATGAG
CTGACCCGCC AGAATGTGAT GAAGTTCACC AAGGTCAATC CAGGGCTTTC TACCTCCGTG
GTGGATGCCC GTGGCAAATC GTGGCGCGGT CGCGCCACCT TTGCCATGGT GCCGACCCTG
GCGCGTCAGC AAAATTTGGA CGCCATGCCA GAGCTGGACC TGTTGGTGAT TGATGAGGCG
CACCATGCAG CGGCCAACAG CTACCGGCGT ATCATCGATA CCGCTCTGGA TCGCAATCCG
GACTGCCGCA TTTACGGTCT TACCGCTACG CCCGGGAGGG GAGATAAACA GGCCCTGCGA
CCTATTTTCA GCAATGTCGC AGACCAGGTC CGACTGGGTG AATTGATCCA AGCGGGCAAT
CTGGTCAAAC CCCGCACCTT TGTCATCGAT GTGGGGGCCC AGGAGGCGCT GAAAAACGTC
CGCAAAACGG TGGATGACTT CGATATGGCT GAGGTGGATC GGGTGATGAA CAAGGCTCCG
GTTACCGAGG CGGTGGTCAA GCATTGGAAG GAGAAAGCAG GAACCCGAAA AACGGTGGTG
TTCTGTTCCA CCGTAGATCA TGCCCGCAAT GTCACCGACG CTTTCAATGC AGCTGATGTT
GAAGCGGTGA TGGTTCATGG GGAGCTCTCT TCAGCAGAGC GGAAAGCCAC CTTATCCCGG
TTTGAAAAGG GGTCGGCCAT GGTGGTGGTG AACGTCGCGG TCCTCACTGA GGGCTACGAC
CATCCTCCGG CCTCCTGTGT CGTGCTGCTC AGACCCAGTT CGTTTAAATC CACTATGATC
CAGATGGTGG GCAGGGGGCT GCGTACCGTC GATCCCAACG AATACCCCGG GGTGATTAAA
AACGACTGCG TGGTGTTGGA TTTTGGTATC TCATCCCTGC TGCATGGCTC TCTTGAGCAG
GATGTGAATC TGGATGGCAA AGAGCTGACG GGGGAAGCGC CTACCAAGCA ATGCCCCCAA
TGCGAAGCCA TTCTTCCCAT TGCCATGCAG GAGTGCTCAC TCTGCGGCTA TATCTGGGAA
TTCGTAACTA GCCCTGAGGA TAATCCTGAG TCGATCGCCG ATTTCATCAT GTCCGAGGTG
GACCTTCTGG CCCGCTCCAG TTTTCGCTGG GTGGACCTGT TTGGTGATGA TGCCGCCATG
ATGGCGGGGG GCTTTAATGC CTGGGGCGGT GTCTTCTACC TTAACGGCTT CTGGCATGCA
GTGGGTGGGG TAAAAGGACA GCCTACCCGG CTGCTCTCCA TCGGGGAACG TACTGTCTGC
CTGGCGGCCG CCGATGACTG GCTCAATGAG CATGAGAGTG ATGAGTCGGC CCACAAAACC
AAGTCCTGGC TTAATCAGCC ACCAACGGAT AAGCAGCTGA AATATCTTCC GCCTGATATG
CAGATGGATA TGGGTATGAC CCGTTATCAA GCCTCTGCGC TACTCACCTT TCGGTTTAAC
AAATCGGTCA TTCGCAACCT GATCTTTCAG GCGGATCGTC AGGCTCTGTC GGAGGTGGCG
TGA
 
Protein sequence
MLRPRQKIFV ERSVTALKEH GNTLGVCPTG GGKTYMLSSV VGKVLKKKEE KACILAHRDE 
LTRQNVMKFT KVNPGLSTSV VDARGKSWRG RATFAMVPTL ARQQNLDAMP ELDLLVIDEA
HHAAANSYRR IIDTALDRNP DCRIYGLTAT PGRGDKQALR PIFSNVADQV RLGELIQAGN
LVKPRTFVID VGAQEALKNV RKTVDDFDMA EVDRVMNKAP VTEAVVKHWK EKAGTRKTVV
FCSTVDHARN VTDAFNAADV EAVMVHGELS SAERKATLSR FEKGSAMVVV NVAVLTEGYD
HPPASCVVLL RPSSFKSTMI QMVGRGLRTV DPNEYPGVIK NDCVVLDFGI SSLLHGSLEQ
DVNLDGKELT GEAPTKQCPQ CEAILPIAMQ ECSLCGYIWE FVTSPEDNPE SIADFIMSEV
DLLARSSFRW VDLFGDDAAM MAGGFNAWGG VFYLNGFWHA VGGVKGQPTR LLSIGERTVC
LAAADDWLNE HESDESAHKT KSWLNQPPTD KQLKYLPPDM QMDMGMTRYQ ASALLTFRFN
KSVIRNLIFQ ADRQALSEVA