Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2596 |
Symbol | |
ID | 4482221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3296914 |
End bp | 3298059 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639723341 |
Product | transposase IS66 |
Protein accession | YP_866499 |
Protein GI | 117925882 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0682749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGAAACT TCACCTTAGC TGACTGTCCT AAAAATGGGT ACCACCTCTG TCCTCATTGC AAACAGGGCG TGAAGACGGC CCCTGCACCC AAACGTCCCA TTCCCAAGGC GTTGGCTACA GCTGCTCTAT TGGCCCATGT GGCGGTATCC AAGTATGCCG ATGGGTTACC GCTCTATCGA CAGGGCGCCA TTCTGACCCG TGCAGGGATT GATGTCTGTC GAACCACGCT GGCCAATTGG ATGATCCAGT GCGGCCAACT GGTGCAGCCG TTGATCAATC TGATGCGGGA CAAGATGCTG GATTACGATA TCCTGCAGAT GGATGAAACA ACGGTTCAAG TGCTTAAGGA AAAAGATAAA GTTGCAGCCA GTAACTCCTA TATGTGGGTA CAGCGAGGTG GTCCTCCGGG TAGTCCGGTG ATTTTGTTTG ATTACGATCC CACACGCGGT GCCGAGGTTC CGAAACGGCT GTTGGCGGGC TATAAAGGCT GGCTGCAAAC GGATGGGTAT GCAGGTTATC TGGGTGTGGG TGCGCAGGAA GATGTGATCC TGATGGGGTG TTTTGCGCAT GCCCGTCGTC AATTTGACGA GGCGATCAAA GCGTTGGGAA AATCCAAAAA AGGCAAGATG GGCAAGGCTG GGCAGGCTCT GTCGCTGATC CGGAAACTGT ACGCTGTGGA AAAAGATCTG CGTGAGGAAG AGGCTACTCC AGAGCGACGT TACAAGGTGC GCCAGGAGCG TTCCCGCCCC ATTATCGATG AGTTGAAAAC CTGGCTGGAA GATAATCGAG CAGGGGTGTT ACCGAAAAGC AAACTCGGCG AAGCGATGGG ATATCTGACC AATCAGTGGT CATCTCTGAT TCGATATTTG GATGATGGAC GCCTGGAAAT TGACAACAAT AGAGCCGAGA ATGCCATTCG CCCCTTTGTG ATTGGCAGGA AAAATTGGCT TTTCAGCAAC TCTGTTCGAG GTGCAAGGGC CTCGGCAAAC CTCTACAGTT TGATCGAAAC GGCCAAAGCC AATGGTTGGG AGCCCTTCGA GTATTTTACA AAGGTCTTTG AGGGCCTCGC CACAGCGCAA ACCGTGGATG AGTTCGACCT GTTGCTCCCG TGGAATTTGA AATCTGCTGC TGAACCGATA GGGTAG
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Protein sequence | MRNFTLADCP KNGYHLCPHC KQGVKTAPAP KRPIPKALAT AALLAHVAVS KYADGLPLYR QGAILTRAGI DVCRTTLANW MIQCGQLVQP LINLMRDKML DYDILQMDET TVQVLKEKDK VAASNSYMWV QRGGPPGSPV ILFDYDPTRG AEVPKRLLAG YKGWLQTDGY AGYLGVGAQE DVILMGCFAH ARRQFDEAIK ALGKSKKGKM GKAGQALSLI RKLYAVEKDL REEEATPERR YKVRQERSRP IIDELKTWLE DNRAGVLPKS KLGEAMGYLT NQWSSLIRYL DDGRLEIDNN RAENAIRPFV IGRKNWLFSN SVRGARASAN LYSLIETAKA NGWEPFEYFT KVFEGLATAQ TVDEFDLLLP WNLKSAAEPI G
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