Gene Mmc1_2596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2596 
Symbol 
ID4482221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3296914 
End bp3298059 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content52% 
IMG OID639723341 
Producttransposase IS66 
Protein accessionYP_866499 
Protein GI117925882 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0682749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAAACT TCACCTTAGC TGACTGTCCT AAAAATGGGT ACCACCTCTG TCCTCATTGC 
AAACAGGGCG TGAAGACGGC CCCTGCACCC AAACGTCCCA TTCCCAAGGC GTTGGCTACA
GCTGCTCTAT TGGCCCATGT GGCGGTATCC AAGTATGCCG ATGGGTTACC GCTCTATCGA
CAGGGCGCCA TTCTGACCCG TGCAGGGATT GATGTCTGTC GAACCACGCT GGCCAATTGG
ATGATCCAGT GCGGCCAACT GGTGCAGCCG TTGATCAATC TGATGCGGGA CAAGATGCTG
GATTACGATA TCCTGCAGAT GGATGAAACA ACGGTTCAAG TGCTTAAGGA AAAAGATAAA
GTTGCAGCCA GTAACTCCTA TATGTGGGTA CAGCGAGGTG GTCCTCCGGG TAGTCCGGTG
ATTTTGTTTG ATTACGATCC CACACGCGGT GCCGAGGTTC CGAAACGGCT GTTGGCGGGC
TATAAAGGCT GGCTGCAAAC GGATGGGTAT GCAGGTTATC TGGGTGTGGG TGCGCAGGAA
GATGTGATCC TGATGGGGTG TTTTGCGCAT GCCCGTCGTC AATTTGACGA GGCGATCAAA
GCGTTGGGAA AATCCAAAAA AGGCAAGATG GGCAAGGCTG GGCAGGCTCT GTCGCTGATC
CGGAAACTGT ACGCTGTGGA AAAAGATCTG CGTGAGGAAG AGGCTACTCC AGAGCGACGT
TACAAGGTGC GCCAGGAGCG TTCCCGCCCC ATTATCGATG AGTTGAAAAC CTGGCTGGAA
GATAATCGAG CAGGGGTGTT ACCGAAAAGC AAACTCGGCG AAGCGATGGG ATATCTGACC
AATCAGTGGT CATCTCTGAT TCGATATTTG GATGATGGAC GCCTGGAAAT TGACAACAAT
AGAGCCGAGA ATGCCATTCG CCCCTTTGTG ATTGGCAGGA AAAATTGGCT TTTCAGCAAC
TCTGTTCGAG GTGCAAGGGC CTCGGCAAAC CTCTACAGTT TGATCGAAAC GGCCAAAGCC
AATGGTTGGG AGCCCTTCGA GTATTTTACA AAGGTCTTTG AGGGCCTCGC CACAGCGCAA
ACCGTGGATG AGTTCGACCT GTTGCTCCCG TGGAATTTGA AATCTGCTGC TGAACCGATA
GGGTAG
 
Protein sequence
MRNFTLADCP KNGYHLCPHC KQGVKTAPAP KRPIPKALAT AALLAHVAVS KYADGLPLYR 
QGAILTRAGI DVCRTTLANW MIQCGQLVQP LINLMRDKML DYDILQMDET TVQVLKEKDK
VAASNSYMWV QRGGPPGSPV ILFDYDPTRG AEVPKRLLAG YKGWLQTDGY AGYLGVGAQE
DVILMGCFAH ARRQFDEAIK ALGKSKKGKM GKAGQALSLI RKLYAVEKDL REEEATPERR
YKVRQERSRP IIDELKTWLE DNRAGVLPKS KLGEAMGYLT NQWSSLIRYL DDGRLEIDNN
RAENAIRPFV IGRKNWLFSN SVRGARASAN LYSLIETAKA NGWEPFEYFT KVFEGLATAQ
TVDEFDLLLP WNLKSAAEPI G