| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2587 |
|---|
| Symbol | |
|---|
| ID | 4483560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 3289431 |
|---|
| End bp | 3290498 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639723334 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_866492 |
|---|
| Protein GI | 117925875 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3415] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.214458 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.439073 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAC ACACTTCTCC ACTCGACCTG ACCAGCAAGC AACGTGAAGC CCTTGAGGGG
CTGCTTCGTG CCTCTAAGAC ACCGCAAAGT CTGATCCCCC GCATTCAGAT CGTTATGCAC
AGCGCGGATG GCCTGTCACC ACCCGAGGTG GCGAAGACTC TGGGTGTCAG CCGTCCCACC
GTGTACCGCT GGCGCGCACG TTTCCAGGAA CTGGGGGTGG ACGGCCTGGC CGATGCGCCG
CGCTCTGGTC AGCCCAGGAA ACTGACCCAA GGCCAGATCC AAGCGGTGCT CCAAGCAACG
GTGGAGAGGA TTCCCCGCGA ATCCACCCAC TGGAGCGTGC GACTCATGGC CGAGTACGCC
GACCTCACCA CTTGGCAGGT CCGTCAGATC TGGCAGGCCG CCGGGCTTAA GCCCCACCGC
CTCAAGACCT TCAAGATCAG CAACGATCCC AACTTCGCCG AGAAGGTAAT CGACGTGGTG
GGCCTGTACA TGAATCCACC GCATAATGCC CTGATCCTTT CCGTAGACGA AAAAACCCAG
ATCCAGGCCC TGGACCGCAC GCAGCCCCAG CTACCGATGA AGCCCGGCCA GATCGAGCGC
CGCACCCACG ACTACAAGCG TAACGGAACC ACCAACCTCT ACGCCGCGTT CAACATCCTC
ACCGGCGAGG TAATGGGGCG CACCACCAAA CGCCACCGGA GCAAGGAGTT TCTGGATTTC
CTACGCCAGA TCGACCGCTC CACTCCAAAG GAACTGGACC TACATCTGAT CTTGGACAAT
TCCAGCACCC ACAAAACCCA GGAGGTCCGA CAATGGCTGG AGGCCAGGCC CCGCTTCAAG
CTGCACTTCA CTCCCACCAG CGCCTCTTGG CTCAACGCCG TGGAAAGCTG GTTCTCATCC
CTGGAGCGCC GCGCAATCCA CCGAGGCGTC TTCACCAGCG TCGAGGACCT GCGCCGGGAG
ATCCACCGCA TCATCAATGA GCACAACGCC CTCTCAGCCA AACCATTCCG CTGGACCCAA
AGTGCAGAAG TTATCCTGGA GGCGGTCAAC AGGGCTAAAC AACTGTAA
|
|---|
| Protein sequence | MAKHTSPLDL TSKQREALEG LLRASKTPQS LIPRIQIVMH SADGLSPPEV AKTLGVSRPT
VYRWRARFQE LGVDGLADAP RSGQPRKLTQ GQIQAVLQAT VERIPRESTH WSVRLMAEYA
DLTTWQVRQI WQAAGLKPHR LKTFKISNDP NFAEKVIDVV GLYMNPPHNA LILSVDEKTQ
IQALDRTQPQ LPMKPGQIER RTHDYKRNGT TNLYAAFNIL TGEVMGRTTK RHRSKEFLDF
LRQIDRSTPK ELDLHLILDN SSTHKTQEVR QWLEARPRFK LHFTPTSASW LNAVESWFSS
LERRAIHRGV FTSVEDLRRE IHRIINEHNA LSAKPFRWTQ SAEVILEAVN RAKQL
|
|---|
| |