Gene Mmc1_2586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2586 
Symbol 
ID4483559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3288203 
End bp3289438 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content52% 
IMG OID639723333 
Producthypothetical protein 
Protein accessionYP_866491 
Protein GI117925874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.594312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.290376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGC ATAACAGGGA ACAGGCTACT GTGCCTACCC CCATGATTGA CGACATCAAA 
ACCCAATCCT TTGGAGTATT CGGCGTAGAT AATGCTATCG TCGATTTTCT CCAGGAATTT
GGCTTCCAGG CGATATTCAA TCGGCGCGGA TGGAGCAAAC GAACGGGGAA GGATCTTCCG
ACGCTGATCA TGTTACTGAT CCTGCATCCT CTGCTGAAGG TGCCGTCCAT TCACCTTTTT
TGCCGCGATC ACTTTCTGTC GGTCTTCGCG GTAGGCAAGG ATACCTTCTA CCGGTTGCTC
CAACGCCAAT TTCCATGGCG GAATGCGCAT TGGGCGCTAA TCAAAAAGTT ACTACCCCAG
TGGCGAACGC TGGATCTCGG CCCCGGCTAC CTTGTTGCCG ATACCACCGT CAAAGAGAAG
CGTGGTGATC GTATTGAAGG TGTTTGCTGG CATCATGACC ACAATACCGG CCGCTCGGTT
GCTGGTTTTG AAGCAGCCCA CTTGGTCTGG GTTAACAAGC AGGGAACCTT GCCACTGGAT
GCCGCTTTGC GTTTTTCAAA GCGGCCTCTG ATCAGCAATC TGCTCCACAT CCTCAGTTAC
CGGTTCGATT GTCGCTCACA TCTTGGACGG CGTTACCGTG AGGCGGCCAA GATGTCTAAG
CTTGATCAGA CTGTCGACAT GGTTGCCAGA GCCATTCAAG CTGGGATTCC GGCCCAGTAT
TTTCTCGCCG ATGCTTGGTA CTCATCGGTT AAGTTCGTCA AGAAAATCCT GGATCTGGGC
GTGGTCCCCC TGATCCGATG GAAGCGCAAC AACACCAAGT TCCTATTCCA GGGCGAGAGA
CTGACCAGCG TCGAACTTTA CACCCGGTTT GCCAAAGGCA AAATCAGGAA AGCTAAGGGG
TCCAAGCGCT TCAAAGGAAC CTTCCTAGAT GCAGAGCACC CCGAAATCGG CCTTATCCGT
CTGTTCTTCG TCCGGCTGAT CGATCCGAAA ACCGGCTCGA AGGAGTGGGC CGTCTTTCTG
ACCACAGACC GGTCAATGGG ACTGTCAAAT ATGATCGAGC ACTACGCCAA CCGCTGGGGG
ATCGAAGTTT TCTACAAGGA ATCCAAACAG CACCTCGGTT TCCTTAATGA GTCCGTCCGA
TCCTTCGAAG CAGTCATCGC CTGCCTACAC CTAGTGTCCC GTGCGGTTAG TTCCGTTACA
TGCGGAGGAA GAAATGCTAT GATTCTTTAT GGCTAA
 
Protein sequence
MDQHNREQAT VPTPMIDDIK TQSFGVFGVD NAIVDFLQEF GFQAIFNRRG WSKRTGKDLP 
TLIMLLILHP LLKVPSIHLF CRDHFLSVFA VGKDTFYRLL QRQFPWRNAH WALIKKLLPQ
WRTLDLGPGY LVADTTVKEK RGDRIEGVCW HHDHNTGRSV AGFEAAHLVW VNKQGTLPLD
AALRFSKRPL ISNLLHILSY RFDCRSHLGR RYREAAKMSK LDQTVDMVAR AIQAGIPAQY
FLADAWYSSV KFVKKILDLG VVPLIRWKRN NTKFLFQGER LTSVELYTRF AKGKIRKAKG
SKRFKGTFLD AEHPEIGLIR LFFVRLIDPK TGSKEWAVFL TTDRSMGLSN MIEHYANRWG
IEVFYKESKQ HLGFLNESVR SFEAVIACLH LVSRAVSSVT CGGRNAMILY G