| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2574 |
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| Symbol | |
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| ID | 4483547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3277699 |
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| End bp | 3278955 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639723321 |
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| Product | serine peptidase |
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| Protein accession | YP_866479 |
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| Protein GI | 117925862 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.195998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGATC GCGCCCGCTT GGAGACCATC CTCTCGGTGA TCGGTCCCCG CGTCGGCCTG
GAACCAACGG CCATGCCCAG CGGCTTTGAG CCCAAAAATT ACAGCTCTGA TTTGATGGTC
ACGCCTAATG GAATCGCCAT CGTGCCCATC CACGGCACCC TGGTGAAACG GGTGGGGGCC
GTCGAGGCTG CTTCGGGGCT CATGTCCTAC GCATCCATTG AAGAAAAACT GCTGGATGCC
GCCACCGACC CAGCCGTGCG AGCAATCCTA ATGGATATCG ACTCCCCTGG TGGTGAGGTT
GGGGGCGTGT TCGATCTGGC CGACATGATC AGTGAAGCGG GGCAGGGCAA GCCCATCTGG
GCGCTGGCCG ATGACGCTTT CTCTGCTGCC TATCTTATCG CCTCCCAGGC TCATCGGATC
ATCGTGCCCC AGACTGCGGG GGTGGGCTCC ATCGGCGTCA TAGCTGTTCA TGTGGATGAG
TCGGAGAAGG ATGCCAAAGA GGGGCGTAGC TACACCACGG TGTTTGCCGG AGCCCGGAAA
AATGACTTTT CCACCCACGC CCCTCTCTCT CTAGAGGCCC GGACTAACCT GCAACTGGAG
GTAGATCGGC TCTACGGTAT GTTCGTCGCC GCCGTGGCGG CAGGTCGCAA GATGCATGAA
TCGGCGGTGC GTGCCACCGA GGCAGGCCTG TTCTTTGGCG ACAAGGCAAT CCGGGTTGGT
CTGGCTGACC AGGTTGGCAC CATCCGGGAT GCCCTGGCTG GCCTGTCAAT AACTATTGAT
GCGTCCAAAA AGACCCATTC TCACCGAGCG GCACTGCCGC GGGAACCTGT GTATATGGAG
GAAACCATGC CCATGGAAGA AAATCCGGCG GCTGAAACAT CTGTTGTCAC GTCACGACAA
TCCCAACCTG ACCTTCACGC CAAATCCGAC ATAATGTCGG ATTTGACTGA CCAATCTGCG
GTATCCAACG TTGTGGACCT AGACAAGGTC CGTGCCGAGC ATGGCCAACA GATGCGCAAT
GAGGCTCAGG CCATTGTCGA TCTGTGTGCT CTTGCTGGGA TGCCTGATCT GGCTGGCGGT
TATATCGCCG AAGGCCAATC TGCCGAAGCG GTGCGCAAAG AGCTACTGGC CAAACGGGCC
GATGCTGAGG AGATCCACTC CGAGGTGATG CCTGGTGATG GCACCCGTAT GCAGCCCAGA
CAGAGTCTTG AAACCAACCC GGTTGTGGCC TCCTGCCGCA AACTCGCCGG TCAATAA
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| Protein sequence | MVDRARLETI LSVIGPRVGL EPTAMPSGFE PKNYSSDLMV TPNGIAIVPI HGTLVKRVGA
VEAASGLMSY ASIEEKLLDA ATDPAVRAIL MDIDSPGGEV GGVFDLADMI SEAGQGKPIW
ALADDAFSAA YLIASQAHRI IVPQTAGVGS IGVIAVHVDE SEKDAKEGRS YTTVFAGARK
NDFSTHAPLS LEARTNLQLE VDRLYGMFVA AVAAGRKMHE SAVRATEAGL FFGDKAIRVG
LADQVGTIRD ALAGLSITID ASKKTHSHRA ALPREPVYME ETMPMEENPA AETSVVTSRQ
SQPDLHAKSD IMSDLTDQSA VSNVVDLDKV RAEHGQQMRN EAQAIVDLCA LAGMPDLAGG
YIAEGQSAEA VRKELLAKRA DAEEIHSEVM PGDGTRMQPR QSLETNPVVA SCRKLAGQ
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