| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2562 |
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| Symbol | |
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| ID | 4483629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3268264 |
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| End bp | 3271815 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639723309 |
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| Product | TP901 family phage tail tape measure protein |
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| Protein accession | YP_866467 |
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| Protein GI | 117925850 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5283] Phage-related tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.881784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.265945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGAA CCACGGCGGC GCTTGAGTTT GTCATTAGGG CAAATGACGA TGAACTGCGT
TCTGCTGTCA CCCGCATGCA GAGCGACTTT CGCCAGGGCG TGCAATCCAT GGCCTCCGCT
GCTCAGACTC AGGCGCAGCG TATCAATGGG GCACTATCGG ACATCGATGC TTTCCGCAAT
CTAAAGCGAC AAATCAGGGA GAGTGAAGAT CAATGGCAGG CGGCCACCCG TGAGGTGGCC
CATCTCGCGG TGCAGATGCG GGAGACCGAA ACACCCACCC GCGCCATGAC CCGCGCCTTT
GAGCAGGCCA AGCGCAATGC CCGTTCTCTG AAGGATCAGG TAGAGGCTCA GCGGGAATCC
CTTCATGGCC TGCGGGGTAA CCTGCGTCAG GCCGGGATCG ATACGACCCG CCTCAGTGAA
AGCCAGGAGC GGCTCCAGCG GGATCTGCGC GCCTCTACCC GTGAGGTGCA GGCTCAAAGT
CGCGTGAACC GTGCCTTTGC CACCATCGGC GTCCGATCCA TGCGCGAGGT AGAGGACGAA
GTCCAGAGGC TAGAGAATGC CTATCGGGAA CTGGCCCGCT CCGGTCGGGT TTCTGCGGCG
GATCTCAACC GTGCTCATCA GCAGATGCAG AGCCGGGTGC GTACCCTGCG TGGTGAAATG
CAGGGCTTAA ACGGTGCCAT GACCGGAATG GCGGGTACTG TGCGCAATCT GGCAGCAGCG
TATGCCGGGT TTGAATCCAT TCGTGCGGCA TCCAACTTTA TCAAAGACTC CATCCTTACC
TATGCCGCCT TTGACGACAC CATGAGGCAG GTGGCGGCTA CATCTGGCGC GACATCAGAA
GAGCTGACCC AACTGACCGA GTTGGCCAAG GAGATGGGAG CCTCTACCCG ATTCAGCGCC
ACTCAGGCAG CGGGTGGTCT CAAAGCCATG TCCCTGGCGG GGCTCTCGGC ATCCCAACAG
CTGCAAGCCC TACCAAAAGT TCTGGAGTTG GCTGCAGCCG GTTCGGTGAA TCTGGAAACC
GCAGCAGGCA TCGCCACCGC CTCTATGGCC CAGTTTGGGT TGCAGGCCCG TGATCTGGGC
AATGTAAACG ACATCCTGGT CACCGCCTTC ACCAACTCCG CCACCAACAT TCAGGATCTA
GGTCTTGCTC TACAGTACGC AGGACCTGTG GCGAAGGCCG CTGGAAACAG CTTTGAAGAG
ACCGCCACCG TGCTGGCCTT GCTGGCCAAG AACGGCTTCT CTGGGGAAAA AGCGGGTACC
GCGCTGCGTA GCGCCTATGC CCGTCTGCTG GCCCCGGTGG ATAAAGCCCA AGAGGCCATC
AACCGTATGG GCCTTCAGAC CCGTGATGCC ACTGGCCAAC TGCTGCCCAT GACGCAAGTG
CTGCGCAACC TGAGGGCAAG CGGGGCCGAT GCCGCCGACA TGATCCAGAT CTTTGGGGTG
GAAGCTGCGC CTGCGTTAAC CGCTGCCGTA GGCATGTCCT CCCAGGCCTT TGAGGCGTTG
GTATCCAAGT TTGAACAGGT GGGCGGTGTC GCCGGGCGTG TGGCCACAGA GATGGAAGCG
GGCATGGGCG GATCCATCCG TTCCCTGGAG TCCGCCTGGG AGGGGGTGAA GATTGCGGTT
GGTGAGGCCA TCGACAAGCA CAGCAGCCTT AATTTTCAAG AGCTCACCGC CGCCATCAAT
GAAAACAAGG ATGCCATCGT CGAGTTGGCT CTGGCTGGTG TGGATCTGGC TGCCATGTTG
GGCCGTGTGG CTCTGATGGT GGGTGAGTTC ATCCTGGCGT GGAAAGAGAT CATCGGCGTG
CTGGGTGGGG CGTATCTGGC CATCAAAACC CTGCGTGTGG CCATGGCAGC ACTCACAGCA
CTTCAGACCG CTCAGTGGTT TCTAACCGTT ACCCGTGCTG CCTCTGGCTT GGTAGCCGTG
GTAGGCGCTC AGGGATTGGT TGGCGCATTG GCGCTGGCCC GCACCCGTCT GCTCTCTCTT
ATCTCCATCA ATCTGGCCGG GTTCTTTATC CGGGGTGCTG CGGGCATTGG TAGTCTTCTG
GCTCTGCTTA CCGGTCCGGT GGGGCTGGTG GCTGGGGCGA CGGCGGCTGT GGGCGCACTA
GGCTACATGG CCTACTCTTG GTGGAAAACC AAGGATGCCC AGGATGAAGC CGTAGCATCG
GGACAGGCAG CTGTTGAGAC CCAGGAGCAG TTGGCTGCCC GTTTGAAGCA GATCGGGCAG
CAACTGGGGA TCAACATTCC CGACATGGAG ACCTTCAACC GTCTACAGCG GGAAGGCACC
ATCATCGCGG ATAAAAGCAC TGGGGGATGG CGCCTGGCTG CAAAGGCCGC TTCCGATGCC
ATTCAGACCC AGAGGCGCGC AGCCCAAGAA GCGGCCAACC AGCTATCCAA CCTGACCCGC
CAGCGGACAT CTGCCCAGCG TAAACTGGCT GCTCTGGAGC AGCAACTGGC CGAAGAACAG
AAGCGCCAGG CCCGTGAGGT GCTTACCGAG AAGATCCGTA CTGCTGAACA GTCGGTCCAG
GCCACGGAAC GCGCCCTGCA ACAGAGCCTG ACTGCTGAGA AGCGATTGGC CGATCAGATC
CAGGGCATCG AAGAGAAAAA GCGCAACGCC CGTATCTCCA CCGAGGATAA GGTGCGCTCG
CTATTGGAAC GCAACATGTC CGACCGGGAG AAAGAGACCT CCCGCGCTGC AGCCGCCTCC
CAAAAGCTGG CTGAGGCCCA ACAGCTGCTC TCCAAAACAA ACCTTTCCGA GCAGGATATC
AAGTGGGCCG AATCCCTGGC CCGTGGGGCC CAGGATGCCT TCTCCAGCCT GAATGACACC
TCCACCGCCA TCCGGGGTGT GCAGGATGCC GGGGATGTGC TGGATAAGCT CTATCAGCGC
CAGGAGGAGA GTGCACGAAA AGCGCTTGCT ACTCAGAAGG ATCAGACTGC CTCCCTCACC
GAGCAGTTGG AAATAGCACG TGGTCAGGTG GATCTGCTCA AACAGGCCAT GGAAGCCCTT
CCTGACCGTG TGACCAAATC AGTCGAGTTG CAAGCCCAGG TTGAGCAGGC CCAATCTGCA
CTCTCAGCCA TCGAAAAGCA GATGGCGGCA CTGAAGGATA AAACCGTCAC CATCACCATG
AAAACCATCG AGGCCAAACA GTCAGGTGGG ATGATCGGTC TAAACCGAGG TGGACGTCTA
CCTGGCTACG GCGGTGGGGA TCGGGTTCAT GCCTTGCTTG AAGCCGGTGA GATCGTGATC
CGCAAAGAGC GCTCCAGGAT CTTCAAGGAT TTGCTGCTGA CCATTAACTC CGCTCCCATG
GAGACCGTGA AGCGTATCCT GCCCAACCTG CCCAGGTTTC AAACCGGGGG GATGGTGGGG
TTGCCGGAGA TCCCAGCGCT TCCTCAGCTC TCCTTTGCAG GAGCTGCTGG TGCTGGGCAG
CCCCCAGTAG AGGGGATTGT TCAGCTTGAT CTGACCATGA ACGGCAGACC GACCGCTTCC
ATCACCAGTC CCCGGCAACA GGTGCGGCAA CTGGTAGATG CCCTCAAGGA ACTGCAGCGC
GGTACCTTCT GA
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| Protein sequence | MARTTAALEF VIRANDDELR SAVTRMQSDF RQGVQSMASA AQTQAQRING ALSDIDAFRN
LKRQIRESED QWQAATREVA HLAVQMRETE TPTRAMTRAF EQAKRNARSL KDQVEAQRES
LHGLRGNLRQ AGIDTTRLSE SQERLQRDLR ASTREVQAQS RVNRAFATIG VRSMREVEDE
VQRLENAYRE LARSGRVSAA DLNRAHQQMQ SRVRTLRGEM QGLNGAMTGM AGTVRNLAAA
YAGFESIRAA SNFIKDSILT YAAFDDTMRQ VAATSGATSE ELTQLTELAK EMGASTRFSA
TQAAGGLKAM SLAGLSASQQ LQALPKVLEL AAAGSVNLET AAGIATASMA QFGLQARDLG
NVNDILVTAF TNSATNIQDL GLALQYAGPV AKAAGNSFEE TATVLALLAK NGFSGEKAGT
ALRSAYARLL APVDKAQEAI NRMGLQTRDA TGQLLPMTQV LRNLRASGAD AADMIQIFGV
EAAPALTAAV GMSSQAFEAL VSKFEQVGGV AGRVATEMEA GMGGSIRSLE SAWEGVKIAV
GEAIDKHSSL NFQELTAAIN ENKDAIVELA LAGVDLAAML GRVALMVGEF ILAWKEIIGV
LGGAYLAIKT LRVAMAALTA LQTAQWFLTV TRAASGLVAV VGAQGLVGAL ALARTRLLSL
ISINLAGFFI RGAAGIGSLL ALLTGPVGLV AGATAAVGAL GYMAYSWWKT KDAQDEAVAS
GQAAVETQEQ LAARLKQIGQ QLGINIPDME TFNRLQREGT IIADKSTGGW RLAAKAASDA
IQTQRRAAQE AANQLSNLTR QRTSAQRKLA ALEQQLAEEQ KRQAREVLTE KIRTAEQSVQ
ATERALQQSL TAEKRLADQI QGIEEKKRNA RISTEDKVRS LLERNMSDRE KETSRAAAAS
QKLAEAQQLL SKTNLSEQDI KWAESLARGA QDAFSSLNDT STAIRGVQDA GDVLDKLYQR
QEESARKALA TQKDQTASLT EQLEIARGQV DLLKQAMEAL PDRVTKSVEL QAQVEQAQSA
LSAIEKQMAA LKDKTVTITM KTIEAKQSGG MIGLNRGGRL PGYGGGDRVH ALLEAGEIVI
RKERSRIFKD LLLTINSAPM ETVKRILPNL PRFQTGGMVG LPEIPALPQL SFAGAAGAGQ
PPVEGIVQLD LTMNGRPTAS ITSPRQQVRQ LVDALKELQR GTF
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