| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2541 |
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| Symbol | |
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| ID | 4483856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3231760 |
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| End bp | 3233994 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639723289 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_866447 |
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| Protein GI | 117925830 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.111653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0440835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTCT ATCTTTGCGA AAAGCCCTCT CAGGGTCGGG ATATTGGCCG CGTTTTAGGG
GCTACCAGCC GTCATGAAGG TTATGTGGCA GGAGCAGGGG TGTGCGTAAC TTGGTGTATT
GGTCATCTTA TGGAGATGGT GGCCCCTGAT GGTTATAGAC CCGAATGGAA AAGTTGGCGG
CTGGATACCC TACCCATCAT TCCCCAACAG TGGCAGCTGG AGCTCACCGC CCGTGGGCGC
AAGCAGTTTA AGGTTATCCA AGGGTTACTC AAGGGTGTAA CGGAGGTGGT GCTCGCCACC
GACGCCGACC GCGAAGGTGA GACCATTGGC CGTGAAGTGT TGGAGCGCTG CCAATACCGG
GGTAAGATCT CTCGCCTCTG GTTATCTGCC CTGGATGATG CCAGCATTCG CAAAGCGTTG
GGCAACCTGC TACCAGGGGA GCAAACCGAG CCCCTCTACC AAGCCGGGCT TGGCCGATCT
CGTGCGGATT GGATGGTTGG GATGAACCTT ACCCGCGCCT ATACCCTTTT GGGTCGGCAG
GGGGGCTATG CAGGGGTGTT GAGCGTGGGG CGCGTGCAAA CCCCCACCCT AAAACTGGTG
GTGGACCGGG ACCGGCTGAT CGAGAACTTT AAACCCGTCG ACTATTTTGA GATTTTTGCC
TTACACCGCG TTCACTCAGG GACGTTCATC GCCAAATGGG TACCGCCCCC TAAGCCTTGC
GATGCCGAGG GTCACTGCTT GGACCGCACC CTCGCCGAAA CGGTCATACA CAAGGTGCAA
GGCCACAGCG GCACCATTAC AAAAGCCGAG ACCAAGCGCG TCAAAGAGCC GCCCCCGCTG
CCATTGGAGC TCTCGACTCT GCAACAAGAG GCTTCGCGGC GCTGGGGCAT GGGTGCCAAA
CAGACCCTTG AGATTGCCCA ATCCCTTTAT GAAAAGCATA AAGCGGTGAC CTATCCCCGC
ACCGATTGCC GTTATCTACC CAGCAACCAG TTTAAAGAGG CCCCGGCGGT ACTACAGGGA
TTGACAACCA ACGATGCCAG CCTCACCCCC TTGGTGGAGG GTGCAGATGC ACAGCTCCGC
TCCAAGGCGT GGAACGACAA AAAAATCACC GCTCACCATG CCATCATTCC AACCGCCGCC
AAGATAAACA TCGACGCCCT CAGCCGCGAA GAGGCTCTGC TGTATGATCT GATTCGCCGT
CACTACTTGG CGCAATTTTA CCCCCCCTTC GAGTATGACC GCACGGTAAT CGACACCCAG
GTCGCCATGG AAACATTCCA CGCCACAGGC CGGGTTGAGC TCATTCCAGG GTGGAAAAGG
GTGCTGGCTG CCAACCAAGA AAAAAAAGAG GGCGACGAGG ATGAGCAAAC GTTACCCGTG
GTACGCAGCG GCGAAGCTGC CACCATTGAG GGGGCTGAAC TGAAACAAAA GCAGACCAAG
CCTCCCAACC GTTATACCGA AGGCACCTTA ATCCAGGCGA TGAAAAGCGT CGGCAAGCTG
GTCGAAGATG CCCGTCTACG CAAGATTTTA AGAGAGACCT CGGGCATTGG CACAGAGGCC
ACCCGTGCCG CCATTCTGGA GACCTTGATT AAACGCAATC TGCTGGCCAA GCAGGGCAAA
AAAAGTCTTG TTAGCATGCC CGCCGGTCGT CTGCTGGTGG ATGCCCTACC CCATAGCGTC
ACCGACCCCG CCACCACCGC AGTCTGGGAA CAGACCCTGG ATGATATTGC CCATGGTGGA
GGATCGCTGG AGACCTTTTT AGCCAAATCC GAGTTATGGC TTAATAAGCT TATTCACAAT
GTTCACCAAC GCCAGCAGCT GGGACTAAAC CCCTTTCGAG GTCTCCCCCC TTCCACGTCG
CATACCGACC CAGCCCAGCC CACTCCGCGC AGGCAACGCC GCTCTAAAGC AGAGGTCACA
CCCACCCCAA ACGCCGCCCC CCTGTGCCCC CAGTGTGGCG GGCCTATGTT ACAGCGTAAA
AGCCCGCAAG GCGCTTTTTG GAGCTGTGCA GAGCAAGCAA CCTGTACGGG CACACGGCCA
GGGAGCCCCC TTGCAGCCCA CTCGCCCCTT ATGCAACCCA ACCCAGAGCG CGGACCTCTT
TGCCCCAAGT GCCAACAAGC CCCCCTGGTA CAGCGCACCG CCTATCGCGG CAAAAATAGC
GGCCAACCTT TCTGGGGCTG CCAGCGTTAC CCCCAGTGCC GCTACACCCA AGCCAGCCAA
ACCACAGAGT CATAA
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| Protein sequence | MILYLCEKPS QGRDIGRVLG ATSRHEGYVA GAGVCVTWCI GHLMEMVAPD GYRPEWKSWR
LDTLPIIPQQ WQLELTARGR KQFKVIQGLL KGVTEVVLAT DADREGETIG REVLERCQYR
GKISRLWLSA LDDASIRKAL GNLLPGEQTE PLYQAGLGRS RADWMVGMNL TRAYTLLGRQ
GGYAGVLSVG RVQTPTLKLV VDRDRLIENF KPVDYFEIFA LHRVHSGTFI AKWVPPPKPC
DAEGHCLDRT LAETVIHKVQ GHSGTITKAE TKRVKEPPPL PLELSTLQQE ASRRWGMGAK
QTLEIAQSLY EKHKAVTYPR TDCRYLPSNQ FKEAPAVLQG LTTNDASLTP LVEGADAQLR
SKAWNDKKIT AHHAIIPTAA KINIDALSRE EALLYDLIRR HYLAQFYPPF EYDRTVIDTQ
VAMETFHATG RVELIPGWKR VLAANQEKKE GDEDEQTLPV VRSGEAATIE GAELKQKQTK
PPNRYTEGTL IQAMKSVGKL VEDARLRKIL RETSGIGTEA TRAAILETLI KRNLLAKQGK
KSLVSMPAGR LLVDALPHSV TDPATTAVWE QTLDDIAHGG GSLETFLAKS ELWLNKLIHN
VHQRQQLGLN PFRGLPPSTS HTDPAQPTPR RQRRSKAEVT PTPNAAPLCP QCGGPMLQRK
SPQGAFWSCA EQATCTGTRP GSPLAAHSPL MQPNPERGPL CPKCQQAPLV QRTAYRGKNS
GQPFWGCQRY PQCRYTQASQ TTES
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