| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2536 |
|---|
| Symbol | |
|---|
| ID | 4483851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 3225853 |
|---|
| End bp | 3228258 |
|---|
| Gene Length | 2406 bp |
|---|
| Protein Length | 801 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639723284 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_866442 |
|---|
| Protein GI | 117925825 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.087707 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA TTAGCCAACC GCTCCGGCAC ACCCTGATTG TGGCCATCAT TGCCATCGTT
GCCCTCGCTT TATTGCTGGA CAGACTCTAT GAATATCAAG TTGTTATGGC AAGAGAGATC
GAAAATCAAC AACTGGCCGA GATGCACGAT AGCTGCTATG TGCTGGCCAA TGATTACTCC
CGCTACCTAT TAGCCAACAA ACAGAGTGAA TTGCGCTTTT CGGTGGCCTC TCAAGGCACC
CGTATTAGCC TGGAGCGCTT GGCGGTCAGC AACAGCGAGG GCATCGTCAT CGCCTCGTCC
CGCAGCTCAG ATATCGATAG AAAAATAGCG GAAATCGCCC CCTTGTTTCG TCTACAGGAT
GCTCAGGAGG CACGCACCCA CAACCAAATT GTCACCCGCC TAAGCGACGA TCATAATAGC
GTGTTGGGTT ATGTGCCGGT CGAAATGCCC TCCCCTACGC ACAGCATCCG CGCCCAAACG
CGCGGGCTGC TTTTTATACA CAACACGCTG CACACCCTCA AAGCCGCCAG TTGGCAAAAC
CTGACCTCAC CCCAAAGCCT GCTACGCTGG CTGGTTACCT TTTTTCTCGT AACGGTCCTT
CTGCTCATTT TGCTCAATCG TGTTTTGTTC CGTCCCCTTG AGCATCTGGA GCAAATGGCG
ACCCGCTTGG CTGAGGGGGA CTGGCAGGCG ACCTCCACAC TTTCAGGGAA AAGTGAACTG
GCCCATCTTG GGCAAGTGCT CAACACCATG CAGAGACACA TTCTGCAAGA ACGTCGCTCC
CTTCAACAGA GCGAATCTCG TTTTAGGACC TTGGTGGAGA CCTCACCCAT CCCCATGTTG
GTTACCCGTG CCGCACCCAA CCAACGAGTA GCCTTGATGA ACCGCAGCTT TACCGATCTG
TTTGGCTATA CCGTGGCCGA TGTTCCCGAC ATCCACCACT GGTGGCCTCT CGCATACCCC
GATCCAACCT ATCGACAGGA GATCCAGCAG CTTTGGCAGG CACGTGTTGA GGAGATGTCC
CTGAAAAAAA CGCAAATTAT GCACCCTGTC ACCGCCAATG TGACCTGCAA CAATGGTAAC
ATTCGTTTTA TTGAAGTGCA TATGTCGGTC ATAGATGATC ATGCTTTGGT AATCTTTCAA
GATTTAACCC ACCGCAAACA AGAAAGCGAG GAGCTGCGCC AAGCCAAAGA GGCCGCAGAG
GCTGCCAACC AAGCCAAAGG GGATTTTTTA GCGGTTATGA GCCATGAGAT CCGCACCCCG
ATGAACGTTA TGCTGGGCAT GGTGGAGGTG CTGCAAGAGT CCACTTTAGA TCAAGAGCAG
CAAGAGCAGT TGCACAGCGT ACAAAAGGCA GGGAAAAATC TGCTTGCCCT GATCAACCAA
ATTTTGGATC TCTCCAAGTT GGATGCCGGG CACTTACAGT TGCAACCAGA AGCGCTCAAT
CTCCATGAGC TTATTAAGGA GGTTGTGGGA CTGGTGGCGG TGCTTGCTTC TGAAAAAAAC
CTTCTTCTTT CCCACCAAAT TGACACAAGC GTACCCCAAT GGATTTTGGC CGACGAGCTG
CGCCTGCGGC AAATCTTGTT CAATTTATTG GGTAATGCCA TAAAATTTAC CGAAAAAGGC
AGCGTAAACA TCACCTTGAG CATGCGTGAC CCACAGCAGC TTGCCCTGGT TATTCGAGAT
ACCGGCATTG GGGTAGATCC TGCGCATCAT CACGCCATTT TTGAACCCTT CACCCAACAA
GATGGCACCA TCACCCGCCG CTTTGGGGGA ACCGGACTTG GATTAACCTT GTCGCGGCGG
CTTGTGGAGT TGATGCATGG GCAGATCCGT ATGGATAGCC AGTTGGGGTG CGGCACCCAA
TTTGAAATCT TGCTGCCGGT AGAGCGCACT CAACCGCCTC GATCCGACCA ACCCCAAGCG
CTTAGCCTAG GGATCATCGA GGCACACCCG GCCCTCGCTC CCACAGACAC ACTGTGCCCC
CGGCTCGACC CTGCTCTCAA CCTATTGTTA GCGGAAGATT CTCCTGACAA TCAATCCCTT
ATTAAGGCAT ATCTAAAACG CACCCCGCAT ATTTTAACCA TTGTCGCCAA TGGTGAAGAG
GCGGTGACGG CTGTAGGCAA TGGCTCATAC GATCTGCTGC TTATGGATAT TCAAATGCCC
ATCATGGATG GTTACACCGC TACCCGCACC ATTCGCCAAT GGGAAAAGGC AGAGGCTCGC
ACCCCCATGC TCATTGTCGC CCTCACAGCC CACGCTTTGG TGGGGGACCG GGAACGCTCC
CTGGCCGAAG GGTGTGATCT GCACCTGACC AAACCCATTC GCAAAAAAGA TCTGTTGGCC
CTGCTGGAGA GCATCGCCCA GCGGCTGGTG CGCCAAGACC ACCAACCCCC AGCAGAGACC
CTTTAA
|
|---|
| Protein sequence | MTTISQPLRH TLIVAIIAIV ALALLLDRLY EYQVVMAREI ENQQLAEMHD SCYVLANDYS
RYLLANKQSE LRFSVASQGT RISLERLAVS NSEGIVIASS RSSDIDRKIA EIAPLFRLQD
AQEARTHNQI VTRLSDDHNS VLGYVPVEMP SPTHSIRAQT RGLLFIHNTL HTLKAASWQN
LTSPQSLLRW LVTFFLVTVL LLILLNRVLF RPLEHLEQMA TRLAEGDWQA TSTLSGKSEL
AHLGQVLNTM QRHILQERRS LQQSESRFRT LVETSPIPML VTRAAPNQRV ALMNRSFTDL
FGYTVADVPD IHHWWPLAYP DPTYRQEIQQ LWQARVEEMS LKKTQIMHPV TANVTCNNGN
IRFIEVHMSV IDDHALVIFQ DLTHRKQESE ELRQAKEAAE AANQAKGDFL AVMSHEIRTP
MNVMLGMVEV LQESTLDQEQ QEQLHSVQKA GKNLLALINQ ILDLSKLDAG HLQLQPEALN
LHELIKEVVG LVAVLASEKN LLLSHQIDTS VPQWILADEL RLRQILFNLL GNAIKFTEKG
SVNITLSMRD PQQLALVIRD TGIGVDPAHH HAIFEPFTQQ DGTITRRFGG TGLGLTLSRR
LVELMHGQIR MDSQLGCGTQ FEILLPVERT QPPRSDQPQA LSLGIIEAHP ALAPTDTLCP
RLDPALNLLL AEDSPDNQSL IKAYLKRTPH ILTIVANGEE AVTAVGNGSY DLLLMDIQMP
IMDGYTATRT IRQWEKAEAR TPMLIVALTA HALVGDRERS LAEGCDLHLT KPIRKKDLLA
LLESIAQRLV RQDHQPPAET L
|
|---|
| |