| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2524 |
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| Symbol | |
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| ID | 4483839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3214075 |
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| End bp | 3215349 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639723272 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_866430 |
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| Protein GI | 117925813 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.283395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0763035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGCGT CGAACGGTCC GGCTGTCGCC GGCAAGGGCA GATATGCTTG GCTCATCTGG
CTGTTGGTGC TGGCTGGGTT GGGTTATGCG GGCTATCAGC GCGTGACCGA GTTGATGCAG
GACCCCTCTG TCAATAAAGA GAAAAAACAG CGTGCCATCC CCGTCGAGGT TGCTCCGGTG
GTGCGGGGTC CGTTGGAGGC CAAACGCACC TTTAGTGGCA CCCTGGAGGC CAATGCTGAA
CTCAGTGTGG CCCCCAAGGT GGCGGGGCGT GTCACCCGCC TGGATGTGCG CTTGGCAGAT
GCCGTAAGCC GTGGGCAGTT GGTGGCGGAG TTGGACCGCC AGGAGCATGA GCAGGTGGTG
GTGCAGAGCC GCGCTGAATT GGCGGTGGCC CAGGCCAATC TGGCCGAGGC CGAGAGCCTG
TTGGAAAATG CGCAGCGTGC TTTAAAACGG TCCGACGAAC TGCGTCAAAA AGGGATCTCC
AGCGAGGTAC AATCCGACAC TGCGCTGGCC AATCAGTTGG CCTACAAAGC CAAGCGGGAT
GTTGCCCGCG CCCAGCTTAT CCGAGCACAA GCCGTCTTAA CCACCGCAGA GATCCGCTTG
GCTTATACCC ATGTAGAGGC CGAGTGGCAG CAGGGTGCCC CGCAACGGCT GGTGGCCGAG
CGCTTGGTGG AGGTGGGGGA GATGGTGGCG GCCAACCAGC CCCTCTTGCG GCTGGTGGAG
TTGGACCCCC TCAAGGGGGT GTTTTATGTC ACGGAGAAGG ATTATCCCCG TCTACAGGTG
GGCCAGCCCT TGCAGCTTAC CACCGATGCT TATCCCCAAC GCAGCTTTCG CGGTACAATC
GAGCGGGTTG CTCCGGTGTT TCGCCAAGCC GCCCGGCAAG CCCGGGTGGA GCTGCAAATT
GAAAATCCCG GTCAGCTCTT AAAACCCGGC ATGTTTATTC GTGCCACAGT GGTGCTGGAA
CAGGTTGCTC AAGCCACCAT CGTGCCCTTT ACCGCTCTGA CAAAATTGAG TGGGGTCGAG
GGGCTCTATA GCCTCTCTGC CGACCGCAGC AAAGTGCAGT GGTGCCCGGT GCGCGTGGGC
ATACGCCAAG CCAGCCAAGT GGCGGTTACA GGTGGCTGTG TGGGGGCCTA TGTGGTCACT
TTGGGGCAGG AGATGCTCAA CGATGGCACG GCGGTGCGGG TTGTGGATAA AAACTCGGCT
GGCAAGGCCC CGGCTGGCAA GGCCCCGATT GCTCAAGGAA ACAAGGCCAC TCCTGCCCAA
GGCTCCACCC CATGA
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| Protein sequence | MVASNGPAVA GKGRYAWLIW LLVLAGLGYA GYQRVTELMQ DPSVNKEKKQ RAIPVEVAPV
VRGPLEAKRT FSGTLEANAE LSVAPKVAGR VTRLDVRLAD AVSRGQLVAE LDRQEHEQVV
VQSRAELAVA QANLAEAESL LENAQRALKR SDELRQKGIS SEVQSDTALA NQLAYKAKRD
VARAQLIRAQ AVLTTAEIRL AYTHVEAEWQ QGAPQRLVAE RLVEVGEMVA ANQPLLRLVE
LDPLKGVFYV TEKDYPRLQV GQPLQLTTDA YPQRSFRGTI ERVAPVFRQA ARQARVELQI
ENPGQLLKPG MFIRATVVLE QVAQATIVPF TALTKLSGVE GLYSLSADRS KVQWCPVRVG
IRQASQVAVT GGCVGAYVVT LGQEMLNDGT AVRVVDKNSA GKAPAGKAPI AQGNKATPAQ
GSTP
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