Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2513 |
Symbol | |
ID | 4482488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3202975 |
End bp | 3203640 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639723261 |
Product | hypothetical protein |
Protein accession | YP_866419 |
Protein GI | 117925802 |
COG category | [S] Function unknown |
COG ID | [COG2119] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0274541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.55837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATGC AAAAAGGGTT TAATCTTAGC AGGTTTCGGG CTATGGTGTC TGCCCCAGCC CCACAGAATT TAACCCGAGG TAAACGACAC ATGGCGTTTG AGAGTATACC CACACCCATT GTCAGTACCG CGCTGCTCAT CGGTTTAGCG GAGATGGGCG ATAAGAGCCA GTTGGTCTGC ATGGTGCTGG CCGCGCGGCA CCGCCCCATG CCGGTGGTGG CGGGGGCCGC CCTGGCCTTT ATGGTGTTAA ATGGGGTGGC TGTCACCCTA GGAGGGGTCT TGGCGCAGCT GCTCCCCCAC ACACTGATTG CACTGCTGGC GGCGGGGCTG TTTGCCCTGT TTGGCGTGCA GATGCTGCGC ACACCCGCTG ACGACGAAGA GGAGCCCCTT CCACCCTCGA ATCGAAGCCT GTTTTTCACC GCTCTGAGCA TGATCTTGAT GGCAGAGATG GGGGATAAAA CCCAAATTGC GGTGGCGGGG CTCTCCACCA CCCTAAACCC GGTTGATGTC TGGCTGGGGG CCACCTTGGC CTTAATCGCC ACCTCGGCCA TGGGTGCGCT GCTGGGGCAT AAAGTGCTAA CCCGCATGCC GATGCAGCGT TTGCATCAGG CGGGCGGACT CCTTTTCCTA CTTATGGCGC TCATGGCGTT GTCGCGGCTG TGGTAG
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Protein sequence | MEMQKGFNLS RFRAMVSAPA PQNLTRGKRH MAFESIPTPI VSTALLIGLA EMGDKSQLVC MVLAARHRPM PVVAGAALAF MVLNGVAVTL GGVLAQLLPH TLIALLAAGL FALFGVQMLR TPADDEEEPL PPSNRSLFFT ALSMILMAEM GDKTQIAVAG LSTTLNPVDV WLGATLALIA TSAMGALLGH KVLTRMPMQR LHQAGGLLFL LMALMALSRL W
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