Gene Mmc1_2513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2513 
Symbol 
ID4482488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3202975 
End bp3203640 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content60% 
IMG OID639723261 
Producthypothetical protein 
Protein accessionYP_866419 
Protein GI117925802 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0274541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.55837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATGC AAAAAGGGTT TAATCTTAGC AGGTTTCGGG CTATGGTGTC TGCCCCAGCC 
CCACAGAATT TAACCCGAGG TAAACGACAC ATGGCGTTTG AGAGTATACC CACACCCATT
GTCAGTACCG CGCTGCTCAT CGGTTTAGCG GAGATGGGCG ATAAGAGCCA GTTGGTCTGC
ATGGTGCTGG CCGCGCGGCA CCGCCCCATG CCGGTGGTGG CGGGGGCCGC CCTGGCCTTT
ATGGTGTTAA ATGGGGTGGC TGTCACCCTA GGAGGGGTCT TGGCGCAGCT GCTCCCCCAC
ACACTGATTG CACTGCTGGC GGCGGGGCTG TTTGCCCTGT TTGGCGTGCA GATGCTGCGC
ACACCCGCTG ACGACGAAGA GGAGCCCCTT CCACCCTCGA ATCGAAGCCT GTTTTTCACC
GCTCTGAGCA TGATCTTGAT GGCAGAGATG GGGGATAAAA CCCAAATTGC GGTGGCGGGG
CTCTCCACCA CCCTAAACCC GGTTGATGTC TGGCTGGGGG CCACCTTGGC CTTAATCGCC
ACCTCGGCCA TGGGTGCGCT GCTGGGGCAT AAAGTGCTAA CCCGCATGCC GATGCAGCGT
TTGCATCAGG CGGGCGGACT CCTTTTCCTA CTTATGGCGC TCATGGCGTT GTCGCGGCTG
TGGTAG
 
Protein sequence
MEMQKGFNLS RFRAMVSAPA PQNLTRGKRH MAFESIPTPI VSTALLIGLA EMGDKSQLVC 
MVLAARHRPM PVVAGAALAF MVLNGVAVTL GGVLAQLLPH TLIALLAAGL FALFGVQMLR
TPADDEEEPL PPSNRSLFFT ALSMILMAEM GDKTQIAVAG LSTTLNPVDV WLGATLALIA
TSAMGALLGH KVLTRMPMQR LHQAGGLLFL LMALMALSRL W