Gene Mmc1_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2500 
Symbol 
ID4484170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3187241 
End bp3187852 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content57% 
IMG OID639723248 
Producthypothetical protein 
Protein accessionYP_866406 
Protein GI117925789 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.71042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0608768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACAG AGCCCCACCC CACCCTGGCA AGCCCTGACC CCATGACCCC CTTTGACGCG 
GCCCCCAACC TGGCGCTGGT GGCCGCGCAG CTCTGTAAAG GGTGCGGGCT TTGCTGTAGC
GGCAGTTTTT TTAGCTATGT CACCCTACAC CCCCATGAGC AGGCCCATTT AACCGAACTT
GGCCTGCCCT CCTATACCCA GAGCAATGGG GAGATTCTCT TTGACCACCC CTGCCCACGT
TTGAAACAGG GCTTGTGCAG CATCTATGCA GAGCGCCCCA AACAGTGCCA AGGCTATCAC
TGCCAGCTGG TGAAAGAGAT CTGGATGGGC ACCCTCACCC CCCAGCAGGG CGAACGCATT
ATTATGACCG CCAAGCAACG GCACGACTGG TTAATCCAAC AGGCCAAAAC GTTGGAGGGG
CGCCCCCCGG GGCCGCTCAA TCTGCGCACC TTTCTCTACC AATATTACCG TCATAACAAA
AAACGCCCGC TGGAGCCCCA GGAGCGCGAT TTTGTACGCA GCAGCTTTGA ATATCTCGCC
CTCATCCGCC GCCATTTTCA TGAAACCAGC ATCCTCGGCA AATATGCCGC ATGGTTACAA
CAGTTGGCGT AA
 
Protein sequence
MSTEPHPTLA SPDPMTPFDA APNLALVAAQ LCKGCGLCCS GSFFSYVTLH PHEQAHLTEL 
GLPSYTQSNG EILFDHPCPR LKQGLCSIYA ERPKQCQGYH CQLVKEIWMG TLTPQQGERI
IMTAKQRHDW LIQQAKTLEG RPPGPLNLRT FLYQYYRHNK KRPLEPQERD FVRSSFEYLA
LIRRHFHETS ILGKYAAWLQ QLA