| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2494 |
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| Symbol | |
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| ID | 4484164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3181177 |
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| End bp | 3182184 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639723242 |
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| Product | NADH ubiquinone oxidoreductase, 20 kDa subunit |
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| Protein accession | YP_866400 |
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| Protein GI | 117925783 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.014165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.608581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGG AGAGCTTACA GCTCATGTGG TTGCAGTCCG GGGGTTGTGG GGGGTGTAGC
CTATCGCTGC TGTGCGCGGA GAATCCGGAT CTCTACACCG CTTTGGCCAG TCATGGTATT
GAGTTGCTCT GGCATCCGGC CCTGAGCGTG GGGCCGGAGG ATGGTTTTTT GGCCCTGTTG
CAGCGGATTG TGCGCGGTGA GCAGCGGCTG GATATCCTCT GTCTGGAAGG GGCGGTGATG
ACCGGCCCCA ATGGCACGGG GGCCTTTCAT CGGTTATCGG GCAGCGGTCG CCCGATGATG
GCGGTGGTCA AAGAGCTGGC TGCACTGGCG GGGCAGGTGG TGGCGGTGGG CAGTTGCGCG
GCCTATGGTG GGGTAACGGC GGGGGGTGGC AACCACACCC AGGCGGTGGG GCTGCACTAT
GTGGGGCGCA AACGGGGGGG GCTGTTGGGG GCCGCTTTTC GCGCACGCCA AGGGCTGCCG
GTGATCAATG TGGCGGGTTG TCCCACCCAC CCCAATTGGG TGCTGGAGTG TTTGGCTGAG
TTGGCCGATG GCAGCTTGAC CGAGGCCCAG TTGGATCCTC TGGGCAGACC CCGTGCCTAT
ACCGATACGT TGGTCCACCA TGGTTGCCCG CGCAATGAGT TTTATGAGTA CAAAGCCAGT
GCGGAAAAGC TGGGGCAGCT GGGCTGCTTG ATGGAGCATT TGGGCTGTTT GGGTACTCAA
GCCCATGCCG ACTGTAATCT GCGTCTGTGG AATGGCGAGG GCTCCTGTCT GCGCGGGGGT
TATCCCTGCA TCAACTGTAC AGCGCCGGGT TTTCAGGAGC CGGGCCATGC CTTTACTGCC
ACGCCCAAGG TGGCGGGGAT CCCTGTGGGT TTGCCCACCG ATATGCCCAA GGCGTGGTTT
GTGGCGCTGG CCTCCCTCTC CAAAGCGGCC ACCCCCAAAC GGTTGCGGGA TAATGCCTTG
GCCGAGCATA TTGTGACCCC GCCGGCCACC CCTGTGGAGA GACCATGA
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| Protein sequence | MAKESLQLMW LQSGGCGGCS LSLLCAENPD LYTALASHGI ELLWHPALSV GPEDGFLALL
QRIVRGEQRL DILCLEGAVM TGPNGTGAFH RLSGSGRPMM AVVKELAALA GQVVAVGSCA
AYGGVTAGGG NHTQAVGLHY VGRKRGGLLG AAFRARQGLP VINVAGCPTH PNWVLECLAE
LADGSLTEAQ LDPLGRPRAY TDTLVHHGCP RNEFYEYKAS AEKLGQLGCL MEHLGCLGTQ
AHADCNLRLW NGEGSCLRGG YPCINCTAPG FQEPGHAFTA TPKVAGIPVG LPTDMPKAWF
VALASLSKAA TPKRLRDNAL AEHIVTPPAT PVERP
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