| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2483 |
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| Symbol | |
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| ID | 4481857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3168450 |
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| End bp | 3170231 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639723231 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_866389 |
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| Protein GI | 117925772 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.190586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.165864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTAT TCTCAGGTAT GCTTTTATTG CTGCTGCTTG GCCTGCCGCT TTCCGTTCAG
GCCGAGGGTG AGGCCGTCTA TAAGGTCGTC TTTACAGGTA TTGCCGAAGA GGGGCCGTTG
CAGAGATTGT TGCAACAGGT TTCTGATACG GTGGCGCGTC AAGATCAACC CCCACCAAGT
CCTTTTCTGC TGGCCCAGCG CGCACGTAAA GATCTGTTGC CGCTGGAGGA GGCGATGCGC
TCTCGTGGCT ATTTTGATGC CCAGGTGGCG CTACTCCCCA TCGCCGAAGC GGCCCCTCCC
TATGGGGTGC GCTTTAAGGT TAGCCCCGGT CCCCTGTATC AGTTGGGGGT ACTCAAAATT
ATGGCTGAAC CGGCGACCCC CGATTTTATC CCGCCGTCAC TGGAAAAATT GGGTTTAAGC
CCCGGTGCTG CTGCCTTGTC GCGCACCATT TTGGATGCCG AAGCGGCGCT GTTGGAGCAG
ACCCGCGAAC AGGGTTATCC CTTTGCCCGT GCCCTCTCGC GGGAGGCGTG GGTACAGCCC
CAAAGCCATA GCTTGGACGT GACATTTCAA ATCGAAACCG GGCCGCTGGT AACACTGGGT
AGCCCGCAAA GGGAGGGGGG TGAAACCGTC GATGCAGCGT TTTTGCAACG CCGTGTGCCG
TGGCCCTCTG GCACCCGTTA TCACCCTCAA CGTATCGCCG AGTTGCGGCA GGCTTTTGTA
AGCACCGGTC TATTCCGGCA GGTGCGCATT ACGCTACCAC GAGAAGCCAA CCCTCAAGGC
TTATGGTCCC CCCTCATCAC TCTGGGAGAA AAAGCCCATC GCACGGTACG CGCGGGGGGA
GGCTGGCATT CGGACCGTGG ACCACAGCTG CATGCCGAGT GGGAACATCG TAACTATTTT
GGGGCCGGGG AGGGGTTAAA TCTATCCACC AAGCTGAGCA GCGATCAACA ACTCCTCAAG
GCCGAATTAA GCAAACCAGA CTTTGGTGAA CGGCGTCGTA CCATGCGCTT GGCCAGCAGT
CTAGAACGGG CGCAAGAGGA GGCCTATGAC CGTTTGGGGG TCAATCTAGA GGGGCACCTG
CTCTGGCCCT GGCGTCAACC TTATGACCTC TCTTTTGGTG CTGATTTGGG GATGGCCTCA
TTGAAGGATC TGAGCAGTAA CAAAAAAGAG AGCTACGCAA CGCTAAGTCT GCCGGTTGGG
ATTAGTGCCG ATGCCACCGA TGACCCCTTG GATGCGGTGC GTGGCTACCG TACCACCTTG
GAGCTGACAC CGGTTATCAA GCTCTATGGC TTTACCTCCA ACTATCTTAA ATTTACCGGC
AATGCCAGTG GTTATTGGCA GTTGCAGGAG CAGCCTCGGT TGGTGCTGGC CAGCCGCCTG
CAACTGGGGA TGGCCATGGG GGCGCCGTAT GAGGATATCC CCGTGGACAA GCGCTTTTAT
GCCGGGGGCG GCGGTACCAT TCGCGGTTAT GGCCATCAAC TGGCTGGCCC GTTGGATAGT
AAGCTGCTGC CCATCGGTGG GCGTTCTATG TTGGTGCTCA ATAGCGAAGT GCGCTACCGG
ATGATGGATA AATTGGGGTT GGTGGGCTTT GTGGATGCCG GGCGTGCTTA TGCCTCCGCC
GTACCCGATG GCTCAGCCGA CCCGCTGGTG GGGGTGGGGC TGGGTTTGCG CTACGCTTCA
CCCATGGGGC CTTTCCGTTT TGATTTAGGG CTCCCCACCA AACAACGGCA GGGTGTGGAT
GATCCCTTTC AAATCTATTT AAGTATTGGG CAGGCTTTTT AA
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| Protein sequence | MRLFSGMLLL LLLGLPLSVQ AEGEAVYKVV FTGIAEEGPL QRLLQQVSDT VARQDQPPPS
PFLLAQRARK DLLPLEEAMR SRGYFDAQVA LLPIAEAAPP YGVRFKVSPG PLYQLGVLKI
MAEPATPDFI PPSLEKLGLS PGAAALSRTI LDAEAALLEQ TREQGYPFAR ALSREAWVQP
QSHSLDVTFQ IETGPLVTLG SPQREGGETV DAAFLQRRVP WPSGTRYHPQ RIAELRQAFV
STGLFRQVRI TLPREANPQG LWSPLITLGE KAHRTVRAGG GWHSDRGPQL HAEWEHRNYF
GAGEGLNLST KLSSDQQLLK AELSKPDFGE RRRTMRLASS LERAQEEAYD RLGVNLEGHL
LWPWRQPYDL SFGADLGMAS LKDLSSNKKE SYATLSLPVG ISADATDDPL DAVRGYRTTL
ELTPVIKLYG FTSNYLKFTG NASGYWQLQE QPRLVLASRL QLGMAMGAPY EDIPVDKRFY
AGGGGTIRGY GHQLAGPLDS KLLPIGGRSM LVLNSEVRYR MMDKLGLVGF VDAGRAYASA
VPDGSADPLV GVGLGLRYAS PMGPFRFDLG LPTKQRQGVD DPFQIYLSIG QAF
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