| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2481 |
|---|
| Symbol | |
|---|
| ID | 4483729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 3162043 |
|---|
| End bp | 3163923 |
|---|
| Gene Length | 1881 bp |
|---|
| Protein Length | 626 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639723229 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_866387 |
|---|
| Protein GI | 117925770 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3176] Putative hemolysin |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.176088 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCAT CGGATGAGCG CCGCCTGATC AAGTTGGATC AAGCCCTGAG CCAAAAATTA
AAGCGTCCGC TGGCAATCGG GCTGGCGAAG GTATTGGAAC CTATCTTGGG CATCAATCGG
TTTAACCGTG AATATATCAA GCTGCTGGAA AAAGATCAGA GCGACGATCA ATTTCTGCAA
AGGGCGCTGG CGTTACTCAT CGGCTCGGTA CAGGTATCCC ATAGCGAGTT GGAACGCATC
CCGGCCAGTG GCGGTGTAAT CCTGGTCGCC AACCACCCCT TTGGCGGTAT TGAAGGGGTG
ATGCTGGCGG TCCTGCTCAA GGCCATTCGT CCAGACATCA AGTTTATTGC CAACTATATG
CTGGGGCAGA TTCCCGAGTT TCGCGATCTG CTCATCCCGG TGGATCCCTT TGGAGGAGAG
AGCGCCACCA AGCGCAACGT GGGGCATGTG GTTAAGGCGA TCCGCTGGGT GCGTAAGGAA
CAAGGGCTGT TGGTGATCTT TCCAGCCGGG GAGGTCTCTA GCCTGGAGCT CAAATCACGC
CGCGTGGTGG ACCCTGCTTG GCAAGTTGGC GCAGCCCGCA TTATTCGCGC GGCCCAGGCA
CAGGTCATAC CCTTGCTGTT TCAGGGCTCC AACGGTCCTC TCTTTCAATT GGCGGGCTTA
ATTCATCCCC GTTTGCGTAC CGCTCTGCTG CCCCGCGAAA TGCTCAACAA AGGGCAGCGC
GATATTCCCT TGCGCATTGG GCACCCCATC GCCTTTAGTC GCCTGGATAA GATGGAGAGC
GACCAAGAGC TTATCGACTA TCTACGCATG CGCACCTACC TGCTGGATGC CGATGAGAAA
AAAGAGCCGC GCACCCCGCT GTCCCCTCAA TCGAACAAGA GCGTGGCAGC GCTGGAGCCC
ATCATCTCGG CCTGTGACCC GCAACTGTTG CGTAAAGAGA TTGATCAGCT ACCTGCCGCC
CAACGGCTCT TGAGCAGCGG CAACCAGACG GTCTATGTGG CCCACGCTCA CCAAATTCCT
ATGCTGTTGC AAGAGATTGG TCGTTTGCGC GAAATCACCT TTCGCGAGGT AGGGGAAGGC
ACGGGCAAAT CCATTGATCT GGACATCTTT GATGCCCACT ACATGCATCT GTTCATCTGG
CAAGAGCAGG CGCAGGAGTT GGTTGGGGCC TACCGCATGG GCCGCCTGGA TCACATTATG
GGCAGCAGCG CAGGCAAAAA GGGGCTTTAT ACCAGCACCC TGTTTAAATA TAAAAAATCC
TTTTTAAAAC AGCTTGGGCC AGCCTTGGAG ATGGGGCGCT CCTTTGTTCG ACCGGAGTAT
CAGCGCAGCT ATGCCCCCCT GCTGTTGTTA TGGAAGGGCA TTGGTCACTA TGTGGTGGCC
CATCCGGAAT ATAAGGTGCT GTTTGGCCCT GTGAGTATAA CCACGGAGTA CACCCCGGCC
TCGCGTCAAT TGATTGTGGG GTATTTAAAA AGCCACAACG ATATGGAGAA CCCGCCCCGC
ATGATTAAGG CGCGTAAACC CTATCGTCTA CAGGGTTTAA AGGGGCTGGT TAGTCCACAG
GCCATTGAGA ATATTCAGGA TGTGGATGCC CTATCTGGTT TGGTGGCGGA GATTGAACGG
GATGGTAAAG GGGTACCGAT TCTGTTAAAG CAATATCTTA AACTGGGCGG GCGCATCGCG
GGCTTTAACA TTGACCCTGA CTTTAGCGAT GTGTTGGATG GTCTTATTTT TGTGGATCTC
ACCCAAACCG AGCAGCGCAC CCTTAACAAA TACATGGGGG CGGCGGGTGC AGAGCGCTTT
TTGGCCTACC ACGCCCAGCG GGAGCATGCC CCAACCGCGC CCCCCAGCAT AGAGGCACCC
GGCCTGCATG GCAGCCATTG A
|
|---|
| Protein sequence | MSPSDERRLI KLDQALSQKL KRPLAIGLAK VLEPILGINR FNREYIKLLE KDQSDDQFLQ
RALALLIGSV QVSHSELERI PASGGVILVA NHPFGGIEGV MLAVLLKAIR PDIKFIANYM
LGQIPEFRDL LIPVDPFGGE SATKRNVGHV VKAIRWVRKE QGLLVIFPAG EVSSLELKSR
RVVDPAWQVG AARIIRAAQA QVIPLLFQGS NGPLFQLAGL IHPRLRTALL PREMLNKGQR
DIPLRIGHPI AFSRLDKMES DQELIDYLRM RTYLLDADEK KEPRTPLSPQ SNKSVAALEP
IISACDPQLL RKEIDQLPAA QRLLSSGNQT VYVAHAHQIP MLLQEIGRLR EITFREVGEG
TGKSIDLDIF DAHYMHLFIW QEQAQELVGA YRMGRLDHIM GSSAGKKGLY TSTLFKYKKS
FLKQLGPALE MGRSFVRPEY QRSYAPLLLL WKGIGHYVVA HPEYKVLFGP VSITTEYTPA
SRQLIVGYLK SHNDMENPPR MIKARKPYRL QGLKGLVSPQ AIENIQDVDA LSGLVAEIER
DGKGVPILLK QYLKLGGRIA GFNIDPDFSD VLDGLIFVDL TQTEQRTLNK YMGAAGAERF
LAYHAQREHA PTAPPSIEAP GLHGSH
|
|---|
| |